| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0612 |
|---|
| Symbol | |
|---|
| ID | 3673723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 640889 |
|---|
| End bp | 642637 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637709284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314370 |
|---|
| Protein GI | 74316630 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.166851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGG TCATGACTTC CATCGATGAC GCAATGAACG CCCCCGAACA TTTCATTCCC
GGCAAGGACG CCTCGCTCGA AGCCTCGATC GCCACCCTGC ATGCCAAGCT CGAGGCGATC
GGCTTCCATG TCGAGGAGCG CTCCTGGCTC AACCCGGTCG AGGGCGTGTG GTCGGTGCAC
ATCCGCGACC GCGACTGCCC CCTGCTGTTC ACCAACGGCA AGGGCGGCTC GGAACTCGCG
GCGCGGGCGA GCGCACTCGG CGAATTCTTC GAGCGGCTGT CGACCAATTA TTTCTGGACC
CACTTCTATC TGGGCGACAC GATCGCCAAC CGGCACTACG TCCACCACCC CGAGGAGCGC
TGGTTCGAAC TGGGCGACGG CAACGCCTGG CCGAAAGGCC TGCTCACGCC CGAACTGCAG
AGGCTCTACG ACCCGGATCG GGCCGTGCGC GCCGCCCAAC TGATCGACCT CAATTCCGGC
AACGCCGATC GTGGCATCTG CGCCATCCCC TACCAGCGGC TCGCCGACGG CGAAACCGTG
TATTTCCCGG TCAACCTAAT CGGCAACCTC TACGTCAGCA ACGGCATGTC GGCCGGCAAC
ACGCTGAAGG AAGCGCGGGC GCAGGCGCTC GCCGAAATCT TCGAGCGCAA CGTCAAGTTC
CGCATCATCC GCGATGGCCT CTGCCTGCCC GACGTCCCCG CGGCCGTGAT CGACCGTTAT
CCACGCATCG CGGCCGGCAT CCGCGGGCTG CGCGAAGCGG GCTTCGGCAT TCTGGTCAAG
GACGCCTCGC TCGGCGGCCG CTACCCGGTC ATGAACGTCA CCCTGCTGCA TCCGGACGAC
CAAGGCTGCT TCGCGAGCTT CGGCGCGCAC CCGCGCTTCG AGGTCGCGCT CGAGCGCGCC
TTGACCGAGT TGTTGCAAGG CCGCGCGCTC GATTCGCTCG AGGGCTTCCC GGCGCCGGGC
TTCGACGAGT CGGAGATCGC CGATCCGCAG AATCTGGAAA TCCACTTCGT CGACTCCAGC
GGCGTGATTT CCTGGCGCTT CCTGCGCGAC ACGCCCGACT TCGAATTCGT CGACTGGAAT
TTCGCCACCA CCACCGACGA GGATTACCGC TGGTCGGTCG ACGCGCTGCA TGCGGAAGGC
CACGAGATCT ACGTCGCGGA TTTCACCCAC CTCGGCGTCT ACGCCTGTCG CATCCTGGTG
CCGGGGGTAT CCGAGATCTA CCCCTTCGAG GAACTCGAAT TCGAGAACAA CAGCGTCGGC
AACCTGATCC GTCCGGCGCT CGCGCGCCTG CCCGAGCTTT CCGACGACGA ATGCGCCGAG
CTGCTCGATC TGATCGGCGA ACTCGAACTC GCCGACGACC GCCTGGTGAG CGTGCTGATC
GGCCTCGCCC CGGATCCCGA CTCGCCGTGG ACCGACCTGC GCGTCGGCGA GTTGAAGTTG
TTGCTCGCGC TGGCGATCGG CGACGACGAC GCGATCCTCG AAGGCTGCGC CTGGATCGCC
CAGTACGGCC AGCGCAGCGA TACGCGCCTC AAGGTCTACC GCTGCATCGC CGACCTCGTC
CAGCTCGACG ACCCGGGTGC GTTCGAGCCG GCGCTGGCGC TGCTGTATGG CCGCGAGACG
CTGGCACAGG CGTTCGCGCT CTACAACCAG GACGAGCGTT TCTTCGGGCT GACCACGCTG
GGCGACGACT TCGAGGGCAG CGCGATCCAC CGGCGCCTGC TGGAGGCGTA CCGCAAGGTG
CGCGGCTAA
|
|---|
| Protein sequence | MLSVMTSIDD AMNAPEHFIP GKDASLEASI ATLHAKLEAI GFHVEERSWL NPVEGVWSVH
IRDRDCPLLF TNGKGGSELA ARASALGEFF ERLSTNYFWT HFYLGDTIAN RHYVHHPEER
WFELGDGNAW PKGLLTPELQ RLYDPDRAVR AAQLIDLNSG NADRGICAIP YQRLADGETV
YFPVNLIGNL YVSNGMSAGN TLKEARAQAL AEIFERNVKF RIIRDGLCLP DVPAAVIDRY
PRIAAGIRGL REAGFGILVK DASLGGRYPV MNVTLLHPDD QGCFASFGAH PRFEVALERA
LTELLQGRAL DSLEGFPAPG FDESEIADPQ NLEIHFVDSS GVISWRFLRD TPDFEFVDWN
FATTTDEDYR WSVDALHAEG HEIYVADFTH LGVYACRILV PGVSEIYPFE ELEFENNSVG
NLIRPALARL PELSDDECAE LLDLIGELEL ADDRLVSVLI GLAPDPDSPW TDLRVGELKL
LLALAIGDDD AILEGCAWIA QYGQRSDTRL KVYRCIADLV QLDDPGAFEP ALALLYGRET
LAQAFALYNQ DERFFGLTTL GDDFEGSAIH RRLLEAYRKV RG
|
|---|
| |