| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0563 |
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| Symbol | |
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| ID | 3673673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 591642 |
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| End bp | 593474 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709234 |
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| Product | sulfate thiol esterase SoxB |
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| Protein accession | YP_314321 |
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| Protein GI | 74316581 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000246299 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.545825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACATG GGCAGGAGCT ACTATTTACC GGGCTCGCCG GCAAACTGAC AATAGAGCCG
ATTCCAGCTA CCGATTCCGA GGAGACCCCC ATGCACATGA ACCGCCGCGA GTTCCTGCAA
CTGCTCGCCG TCGCGGCCGC GTCCGGCATG GCGCTGGACA GCAAGTCCGC GCTCGCCGGC
AAGGCCCCGG CCAATTTCTA CGACGTGCCG CGTCACGGCA ACGTCTCCTT CCTGCACTTC
ACCGACTGCC ACGCCCAGCT GCTGCCGGTG TGGTTCCGCG AGCCCAACGT CAACCTCGGG
GTCGGCGCCG CGCACGGCAA GGCGCCGCAC CTGGTCGGCC AGCATCTGCT CAAACAGTTC
GGCATCAAGC CGGGCAGCGC CGAAGCCCAT GCCTTCACTT ACCTCGACTT CACCGAAGCG
GCCAAGGTCT ACGGCAAGGT CGGGGGCTTC GCCCATCTGA AAACGCTCGT GGACAAGCTG
CGCGCGCAGC GCCCGGGCGC GCTGCTGCTC GACGGCGGCG ATACCTGGCA GGGCTCGGCG
ACTTCGCTGT GGACCAACGC TCAGGACATG GTCGACGCCT GCATCAAGCT TGGCGTCAAT
GTCATGACAC CCCACTGGGA GTCGACCTTC GGCGCCGAGC GCGTGCTGGA AATCGTGAAC
GGCGACTTCA AGAAGGCGAA CATCGATTTC GTCGCGCAGA ACGTCGTCAC CAACGACTTC
GGCGACCAGG TGTTCAAGCC CTACGTCATG AAGGACATGA ACGGCGTCAA GGTCGCGGTG
ATCGGCCAGG CTTTCCCCTA CACGCCGATC GCGAACCCGC GCCACATGGT GCCGGACTGG
AGCTTCGGCA TCCGTGACGA CAGCATGCAG CAGTTCGTCG ACCAGGCCCG CGCCGAAGGC
GCGAAGGTCG TCGTCGTGCT CTCGCACAAC GGCATGGACG TCGACCTCAA GATGGCGAGC
CGCGTGACCG GCATCGACGC GATCTTCGGC GGACACACCC ACGACGGCGT GCCGCAGCCG
ACGAAAGTCA AGAACGCAAA GGGCGTGACG CTGGTCACCA ATGCCGGCTC CAACGGCAAG
TTCCTCGGTG TCATGGACTT CGACGTGCGC GGCGGCAAGG TGCAGAGCTA CAAATACCGC
CTGCTGCCCG TGTTCTCCAA CCTGCTGCCC GCCGACCCGG GCATGGACGC CTTCATCAAG
CAGGTGCGCG CGCCCTACGA AGCCAAGCTG AGCGAAAAGC TCGCCGTCAC CGACGACTTC
CTCTACCGCC GCGGCAACTT CAACGGCACC TGGGACCAGT TGCTGGTCGA CGCGCTGATG
GAGGTCAAGG GCGCCGACGC GGCGTTCTCG CCCGGTTTCC GCTGGGGGAC CACGCTGCTG
CCCGGTGACG CGATCACGAT GGAACGGCTG ATGGACCAGA CCGCGATCAC CTATCCGCAG
ACCACGCTCA CCGAGATGAC GGGCGAAACG ATCAAGACGA TCATGGAAGA CGTCGCCGAC
AATCTGTTCA ACGCCGACCC GTACTACCAG CAGGGCGGCG ACATGGTCCG CGTCGGCGGC
ATCGAGTACA CGATCGACCC GAACAAGAAG ATCGGCCAGC GCATCGGCGA CATGAAGCTG
AACGGGAAAC CGGTCAGCGC CGACAAGACC TACATGGTCG CGGGCTGGGC GCCGGTCGGC
GAAGGCGTCC AAGGCGAACC GGTATGGGAC GTCGTCGCCA CTTACCTGCG CGACAAGAAA
GTGATCAAAG GCCTGAAGCT CAACGAACCG AAGATCGTCG GCGTGGGCAA ATCCAATCCA
GGCATCGCTG CCTACTCGGG CGGCCTCTCG TAA
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| Protein sequence | MEHGQELLFT GLAGKLTIEP IPATDSEETP MHMNRREFLQ LLAVAAASGM ALDSKSALAG
KAPANFYDVP RHGNVSFLHF TDCHAQLLPV WFREPNVNLG VGAAHGKAPH LVGQHLLKQF
GIKPGSAEAH AFTYLDFTEA AKVYGKVGGF AHLKTLVDKL RAQRPGALLL DGGDTWQGSA
TSLWTNAQDM VDACIKLGVN VMTPHWESTF GAERVLEIVN GDFKKANIDF VAQNVVTNDF
GDQVFKPYVM KDMNGVKVAV IGQAFPYTPI ANPRHMVPDW SFGIRDDSMQ QFVDQARAEG
AKVVVVLSHN GMDVDLKMAS RVTGIDAIFG GHTHDGVPQP TKVKNAKGVT LVTNAGSNGK
FLGVMDFDVR GGKVQSYKYR LLPVFSNLLP ADPGMDAFIK QVRAPYEAKL SEKLAVTDDF
LYRRGNFNGT WDQLLVDALM EVKGADAAFS PGFRWGTTLL PGDAITMERL MDQTAITYPQ
TTLTEMTGET IKTIMEDVAD NLFNADPYYQ QGGDMVRVGG IEYTIDPNKK IGQRIGDMKL
NGKPVSADKT YMVAGWAPVG EGVQGEPVWD VVATYLRDKK VIKGLKLNEP KIVGVGKSNP
GIAAYSGGLS
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