| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0553 |
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| Symbol | alaS |
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| ID | 3673663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 581267 |
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| End bp | 583927 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709224 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_314311 |
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| Protein GI | 74316571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTACT GTCCGCCGTT CACGCACGAT GCCCCCCGAA ACATGAAAAG CAGCGCCATT
CGTCAGAGCT TCCTCGACTT CTTCGCCTCG AAGGGGCATA CGGTCGTGCC GTCCAGTTCG
CTGGTGCCGG GCAACGATCC GACGCTGCTG TTCACCAACG CCGGGATGGT GCAGTTCAAG
GACGTGTTCA CCGGCCAGGA CACCCGCCCC TACAGCCGCG CCGTGTCGTC GCAGCGCTGC
GTGCGCGCCG GCGGCAAGCA CAACGACCTC GAGAACGTCG GCTACACCGC ACGTCACCAC
ACCTTCTTCG AGATGCTGGG CAACTTCAGC TTCGGCGACT ATTTCAAGCA GGACGCGATC
AAGTACGCCT GGGAATACCT CACCACCGTG CTGAAGCTGC CGAGCGAAAA ACTCTGGGTC
ACGGTCTACG CGGAGGACGA CGAGGCCTAC GACATCTGGC ACAACGACGT CGGCGTGCCG
AAGGCGCGCA TCGTCCGCAT CGGCGACAAC AAGGGTGCGC GCTACGCCTC CGACAATTTC
TGGGCGATGG GCGACACCGG CCCCTGCGGC CCCTGCACCG AGATCTTCTA CGACCACGGC
CCCGACGTCG CTGGCGGCCC GCCCGGCTCG CCCGACGAGG ATGGCGACCG TTACATCGAG
ATCTGGAACA ACGTGTTCAT GCAGTTCAAT CGCGACGAGG CCGGCACGAT GCATCCGCTG
CCCAAGCCCT CGGTCGACAC CGGCATGGGC CTCGAACGCA TCTCGGCGGT CATGCAGCAC
GTGCATTCGA ACTACGAGAT CGACCTCTTC CAGGCACTGA TCGCCGCCGC CGCGCGCGAG
ACCAACACCC ACGATCTGGG CAACAACTCG CTCAAGGTCA TCGCCGACCA CATCCGCGCG
TGTTCCTTCC TGATCGTCGA CGGCGTCATC CCCGGCAACG AGGGCCGCGG CTACGTGCTG
CGCCGCATCA TCCGCCGCGC GATCCGCCAC GGCTATAAAT TGGGCGCGCG TGCGGCCTTC
TTCCACCGCA TCGTGCCCGA CCTCGGGATC GCGATGGGCG AGGCGTATCC GGAACTCGTC
AAGGCGCAGA CGCGCGTGAT GGACATCCTG CGGCAGGAAG AGGAGCGCTT CTTCGAGACC
ATCGAGCACG GCATGGGCAT CCTCGAGTCC GAACTCAAGA AACTCGTCGC CGGCGGCGTG
TTCGACGGCG AACTCGCGTT CAAGCTGCAC GACACCTATG GATTTCCGCT CGACCTTACC
GCCGACATCT GCCGCGAGGC CGGCGTTGCC GTCGACACCG CCGCCTTCGA CGCCGCGATG
GCGCGTCAGA AGGCGCAGGC CCGCGGCGCC GGCAAGTTCA AGCTCGGCGC CGGCCTAGAC
TACGCCGGCG AGGCGACGAC CTTCCACGGC TACGACACCC TGGCCCGCGA AGCCAGCGTG
CTCGCGCTCT ACAAGGACGG CAGCGCGGTC GGCGAACTCA AGGAAGGCGA CTCTGGAGTC
GTCGTGCTCG ACCACACCCC GTTCTATGCG GAATCGGGCG GCCAGGTCGG CGACCGCGGC
ACGCTGCAGA GCAAGCAAGG CGCCTTCGAA GTCGAGGACA CGCTGAAGAT CCAGGCGCAG
GTATTCGGCC ATCACGGCGT GGTCAAGACG GGCTCGCTCG CGGTCGGCGA TTCGGTTCTC
GCCCGCGTCG ACGAGACCGC GCGCGCGCGT ACGATGCGCA ACCACTCGGT CACCCACCTC
ATGCACAAGG CCCTGCGCGA GGTGCTCGGC GAACACGTGC AGCAGAAAGG CTCGCTCGTC
GACAGCGAAA AAACCCGCTT CGACTTCGTA CAGCCGAGCC CGATGACCGC GGCCCAGATC
CGCGAGGTCG AGGCGCGCGT CAACGCCGAA ATCCTCGTCA ACACGCCGAC CCAGGCGCGC
GTAATGGGCA TCGAAGATGC GCAGAAGACC GGCGCGATGA TGCTCTTCGG AGAAAAGTAC
GGCGACGAGG TGCGCGTGCT CGACATCGGC AGCTCGCGCG AGCTGTGCGG GGGCACCCAC
GTCGCACGCA CCGGCGACAT CGGCCTCTTC AAGATCGTCT CCGAATCGGG TGTGGCCGCC
GGCGTACGCC GCGTCGAGGC CATCACCGGC GACAACGCGC TCGCCTACCT GCAGGCCCGC
GAACAGGAGA TCCAGCAGGC GGCAGCGGCG CTGAAGGCGC ATCCGGCCGA GCTCGGCGCG
AAGCTCGCGC AGACGCTCGA CCACGTCCGC GCGCTCGAGA AGGACCTCGA GCGCCTGAAA
TCGAAGCTCG CCGCGAGCGC GGGCGACGAG CTCGTCGCCC AGGCGGCCGA TATCAACGGT
GTGAAGGTGC TCGCCGCACG GCTCGACGGC ATCGACGCGA AGGGCTTGCG CGAGACGGCC
GACAAGCTGC GCGACAAACT CAAATCGTGT GCGCTCGTGC TCGGCACGGT CGCCGACGGA
AAGGTGAGCC TGATCGCCGC GGTGACGCCC GACGTTACGG CGAAGATCAA GGCGGGCGAA
CTCGTCAACG TCGTCGCGGC CCAGGTCGGC GGCAAGGGAG GCGGCAAACC CGATCTGGCG
ATGGCCGGGG GAACCGACCC CGGCGCGCTG CCCGCCGCAC TCGCCTCCGT CGAGGCCTGG
GTGCAAAGCC GGCTGAGCTG A
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| Protein sequence | MPYCPPFTHD APRNMKSSAI RQSFLDFFAS KGHTVVPSSS LVPGNDPTLL FTNAGMVQFK
DVFTGQDTRP YSRAVSSQRC VRAGGKHNDL ENVGYTARHH TFFEMLGNFS FGDYFKQDAI
KYAWEYLTTV LKLPSEKLWV TVYAEDDEAY DIWHNDVGVP KARIVRIGDN KGARYASDNF
WAMGDTGPCG PCTEIFYDHG PDVAGGPPGS PDEDGDRYIE IWNNVFMQFN RDEAGTMHPL
PKPSVDTGMG LERISAVMQH VHSNYEIDLF QALIAAAARE TNTHDLGNNS LKVIADHIRA
CSFLIVDGVI PGNEGRGYVL RRIIRRAIRH GYKLGARAAF FHRIVPDLGI AMGEAYPELV
KAQTRVMDIL RQEEERFFET IEHGMGILES ELKKLVAGGV FDGELAFKLH DTYGFPLDLT
ADICREAGVA VDTAAFDAAM ARQKAQARGA GKFKLGAGLD YAGEATTFHG YDTLAREASV
LALYKDGSAV GELKEGDSGV VVLDHTPFYA ESGGQVGDRG TLQSKQGAFE VEDTLKIQAQ
VFGHHGVVKT GSLAVGDSVL ARVDETARAR TMRNHSVTHL MHKALREVLG EHVQQKGSLV
DSEKTRFDFV QPSPMTAAQI REVEARVNAE ILVNTPTQAR VMGIEDAQKT GAMMLFGEKY
GDEVRVLDIG SSRELCGGTH VARTGDIGLF KIVSESGVAA GVRRVEAITG DNALAYLQAR
EQEIQQAAAA LKAHPAELGA KLAQTLDHVR ALEKDLERLK SKLAASAGDE LVAQAADING
VKVLAARLDG IDAKGLRETA DKLRDKLKSC ALVLGTVADG KVSLIAAVTP DVTAKIKAGE
LVNVVAAQVG GKGGGKPDLA MAGGTDPGAL PAALASVEAW VQSRLS
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