| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0550 |
|---|
| Symbol | |
|---|
| ID | 3673801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 576597 |
|---|
| End bp | 577910 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637709221 |
|---|
| Product | ATPase, Type II secretory pathway component |
|---|
| Protein accession | YP_314308 |
|---|
| Protein GI | 74316568 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATCTCG ACTACTTCGG CCTGAAAGAA GCGCCCTTCC GCATCACGCC GAACACCGAG
TACTGGTACG CCGGCGGCCA GCGTGGAGAA ATCCTTGCGG CATTGCTCTA CGCGATCGCG
CACGGTGAAG GCATCATCAA GGTCGTCGGC GAGGTCGGCA GCGGCAAGAC CATGCTGTGC
CGCAAGCTCG CAGCCCAGCT TCCCGACGAT GTCGACAGCG TCTACCTCGG CAATCCGTCG
CTCGACCCCG ACGACATGCT GGCCGCGATC CTCGCCGACC TCGGCGAAAC CACGGCGAGC
GGGCGGCACG CGCGCCTCGC CCAGCTCAAC GCCGTGCTCC TCGCCCGGCA CGAGGCGGGA
CGGCGCGTCG TCGTGTTCGT CGAGGAAGCG CAAGGCATTG CCCTCGACAA GCTCGAATTC
CTGCGCCTTC TGACCAACCT CGAGACCGCC ACTGACAAGC TCCTGCAAAT CGTGTTGTTC
GGCCAGCCGG AACTCGACAC CCAGCTCGCC GACCCGCGCA TCCGCCAGCT CAGGGACCGC
ATCACCCTGA GCCTCTACCT GTCGCCCCTG AACGAAGGCG AAGTCGGCGA CTACCTGCGC
GCCCGTCTTG CCGTTGCCGG CTACCGCGGG CCCGACCTGT TCTCGGAAGC CCTGATCGCG
CGCCTCACAC GCCTGTCCGC GGGACTGTCG CGGCGCATCA ACGTGCTCGC CGACAAGACC
CTGCTCGCAG CCTACGCCGC CCAGACCCAC ACCCTGACGC TCGCCCACCT CGACGCCGCG
GCCGGCGACG CCGAGCTGCC GCAGACTCAA CGCACCGCGC CGCGCCGCAT GACGAATCGG
CGTTGGGCCT GGCTGGGCGT GGGCGCGGTC GCGCTCGGAC TGCTCGCCTG GGCTGCCTGG
CAAGCGCGCC CACAACCTTC CGCCGCGATC CCGGCGGCTG CGGCGGTTCC GGAGCCCGCC
GTATCCCACG CTGTACGCGT CCTCGACGAG GCGCGCCTGA CCCGGCAATG GCTCGCTGCC
GCGGCGCCGG GCACCCATGT CATCCAGGTC GCTGCGGCTA AAGATGCGGC GCAGGCAGCC
GTATTATTGG CAGGCCTGGA TCCCAACACG CCACGGCCCG TGCGCGTGTT CTACGGACGC
AGCCGGGGCG CCCCTGCCTG GATGATACTG GTCGGAGAAT TCCCCGACCG TGACGCGGCG
ACGACGGCCC TGCGCCAGCT GCCGGCCACG ACGCCCGGCG TCGAGGCCCT GCGGGACGCG
CCGTTTCTGC GCACCGTAAG GAAAATGCGC GCCGTGGCGC TGCCTACTGG ATGA
|
|---|
| Protein sequence | MYLDYFGLKE APFRITPNTE YWYAGGQRGE ILAALLYAIA HGEGIIKVVG EVGSGKTMLC
RKLAAQLPDD VDSVYLGNPS LDPDDMLAAI LADLGETTAS GRHARLAQLN AVLLARHEAG
RRVVVFVEEA QGIALDKLEF LRLLTNLETA TDKLLQIVLF GQPELDTQLA DPRIRQLRDR
ITLSLYLSPL NEGEVGDYLR ARLAVAGYRG PDLFSEALIA RLTRLSAGLS RRINVLADKT
LLAAYAAQTH TLTLAHLDAA AGDAELPQTQ RTAPRRMTNR RWAWLGVGAV ALGLLAWAAW
QARPQPSAAI PAAAAVPEPA VSHAVRVLDE ARLTRQWLAA AAPGTHVIQV AAAKDAAQAA
VLLAGLDPNT PRPVRVFYGR SRGAPAWMIL VGEFPDRDAA TTALRQLPAT TPGVEALRDA
PFLRTVRKMR AVALPTG
|
|---|
| |