Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0539 |
Symbol | |
ID | 3673790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 562894 |
End bp | 564870 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709210 |
Product | antiporter-2, CPA2 family monovalent cation/proton antiporter |
Protein accession | YP_314297 |
Protein GI | 74316557 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCCG GTAGCAGCCT TCAGCTCGTC CTGATCCTGC TCGCGGTGGC GGTGCTGGTG GCGGCCGCGG CGCGTGCGCT GCGCCTGCCG ACCATGCTCG CCTATCTCGT CACCGGGATC GCGATCGGCC CGTTCGCGCT CGGCTGGATT CCGGACAGCG ACGAGGCGCG TTATCTGGCC GAATTCGGCG TCGTGTTCCT GATGTTTTCG ATCGGCCTCG AATTCAGCCT GCCGCGTCTG ATGACAATGC GCATGACCGT GTTCGGCTTC GGCGGCGCAC AGGTCGTGCT GACCATTGTC CTCAGCGCCG CGGTCGCCTG GATGCTCGGA TTGCCCCCGC TCGCCGCGCT CGCCGTCGGC GGCATCATGT CGATGTCGTC GACCGCGATC GTCTCGAAAA TGCTGACCGA ACGGCTCGAG GTGCAGACCT CGCACGGACG CCAGATCTTC GGGGCGCTGC TGTTTCAGGA TCTCGCAGTG GTGCCGCTGC TGATCCTGAT CCCGGCTTTT GCCAAGGAAT CGGACGCGAT GGCCGCGACC CTCGGTCTGG CCTTGCTCAA GGCGACGGTC GTCCTCGGCT TCCTACTGTT CGTCGGTCAG CGCGTCATGC GGCCGTGGTT CCAGTGGGTC GCGGGGCACA AGTCGCCCGA GCTTTTCACC CTCAATTTGC TGCTTTTCAC GCTCGGCCTC GCCTTCCTGA CCGAGAGCGC CGGCCTGTCG CTGGCGCTCG GGGCCTTCCT CGCTGGCATG CTGGTGTCCG AGACCGAATA CCGCTACCAA GTCGAGGACG ACATCAAGCC TTTCCGGGAC GTGCTCCTGG GCCTGTTCTT CGTCACGATC GGCATGCGTC TCGACCCCAC GCAGGTGATG CTCGACTGGG CCGACGTGCT CATGATCGTC GCGGCGATCG TCATCGGCAA GGGCGTGCTC GTCGCGGGTC TCGCAATGGC CTTCGGCAGT GGCCGGCCGA CCGCGTGGCG CACCGCTCTT GGGCTCGCGC AGGCGGGCGA ATTCGGCTTC GTTCTGCTCG CGCAGGCGGC CGACCTCAGG CTGCTCGGCG TCGAGGTCGC CCAGCCGCTG CTCGCCGCGA TGGTGCTGTC GATGCTGATC GCTCCGCTGC TGATCCACCG GATGGACACC CTCACGCGGC TTCTTGCCGG CAGCGAGTGG TCCGGGCGCG CCAAGGAAGT GCACGACATT TCGATCAAGA GCTTCGGCAA GACCCGCCAC GTGATCGTCT GCGGCTACGG GCGCAGCGGC CAGAATCTGG CGCGCCTGCT CGAGGCCGAA GGCATCACCT TTATCGCACT CGACGCCGAC CCCGAGCGCA TCCGCGCGGT CGCAGCGTCA GGCGTTTCGG CCGTCTACGG CGATGCGAGC CGGCGTGAAG TGCTGGTCGC CGCGGGCTTG AGCCGGGCGC AGGCCGTCGT TGTCACCTAT TCCGACGTGC ATTCGAGCAT GGCCATCCTG CGTCATGTGC GCGAGCTGCG ACCGGAGGTC CCGGTCATCG TGCGCACGAT CGACGACACC CATATCGACG CCTTGAAGGC GGCCGGCGCG GCCGAAGTCG TGTCGGAAGT GATGGAAGGC TCGCTGATGC TCGCCTCGCA CGCGCTGATG CTGCTCGGCG TGCCGCTCGC CCAGGTGCTG AGGCGGGTGC GTGACGTCCG CGACACGCGT TACGCGCTGA TGCGCGGGTT TTTCCGTGGC GCGAGCGACG TCGACCACGA ACTCGACCAG CAGAGCCAGC CGCGCCTGAA CACCGTGCTG ATCACCCAGG GCTCGGCCGC GGCGGGGCAC ACGCTCGCGG AACTGGCCTT GGACGAATTG GCGGTCGAGG TGGTCGCGAT CCGCCGTCAG GGCATCAAGG GCGTCGACCC GCAGCCCGAG GCCGAAATCC GCGTGGGCGA CGTGCTGGTG TTACGGGGCG GCGCCGGGGG GCTGGCGGCG GCGGAGTTCA GGTTATTGCA GGGCTGA
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Protein sequence | MHSGSSLQLV LILLAVAVLV AAAARALRLP TMLAYLVTGI AIGPFALGWI PDSDEARYLA EFGVVFLMFS IGLEFSLPRL MTMRMTVFGF GGAQVVLTIV LSAAVAWMLG LPPLAALAVG GIMSMSSTAI VSKMLTERLE VQTSHGRQIF GALLFQDLAV VPLLILIPAF AKESDAMAAT LGLALLKATV VLGFLLFVGQ RVMRPWFQWV AGHKSPELFT LNLLLFTLGL AFLTESAGLS LALGAFLAGM LVSETEYRYQ VEDDIKPFRD VLLGLFFVTI GMRLDPTQVM LDWADVLMIV AAIVIGKGVL VAGLAMAFGS GRPTAWRTAL GLAQAGEFGF VLLAQAADLR LLGVEVAQPL LAAMVLSMLI APLLIHRMDT LTRLLAGSEW SGRAKEVHDI SIKSFGKTRH VIVCGYGRSG QNLARLLEAE GITFIALDAD PERIRAVAAS GVSAVYGDAS RREVLVAAGL SRAQAVVVTY SDVHSSMAIL RHVRELRPEV PVIVRTIDDT HIDALKAAGA AEVVSEVMEG SLMLASHALM LLGVPLAQVL RRVRDVRDTR YALMRGFFRG ASDVDHELDQ QSQPRLNTVL ITQGSAAAGH TLAELALDEL AVEVVAIRRQ GIKGVDPQPE AEIRVGDVLV LRGGAGGLAA AEFRLLQG
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