| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0534 |
|---|
| Symbol | |
|---|
| ID | 3673785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 559359 |
|---|
| End bp | 560081 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709205 |
|---|
| Product | ATPase component ABC-type transport system |
|---|
| Protein accession | YP_314292 |
|---|
| Protein GI | 74316552 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.32942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGA TATCGGTTCA AGGCTTGCGC AAGACCTACG GCAAGCGCAC CGTCGTGCAC
GACGTGTCGT TCGACGTCAA AAGCGGCGAG GTCGTCGGGC TGCTCGGCCC CAACGGGGCC
GGCAAGACGA CCTGCTTCTA CATGGTCGTC GGCCTGGTCG CCGCGGACGG CGGCACCGTG
CACCTCGACA CGCACAACCT CACCCACATG GCGATCCACC AGCGCGCGCG CCTCGGCCTC
TCCTACCTCC CGCAGGAGCC GTCGATCTTC CGCAAGATGA CGGTCGAGGA AAACATCCTC
GCCATTCTCG AACTCAAGCC CTACAGCGAG GAGGAGCGCG AGGAGCACCT CGACAACCTG
CTCGAGGACC TGCACATCGC CCACCTGCGC GAGGCCTCGG CGGTCAGCCT GTCGGGCGGC
GAACGCCGGC GCGTCGAGAT CGCACGGGCG CTCGCGATCA ACCCGCGTTT CGTCCTGCTC
GACGAGCCCT TCGCCGGTGT CGACCCGATC GCGGTGCTCG ACATCCAGAA GCTGGTCCAT
TTCCTGGTCG AACGCGAAAT CGGCGTCCTC ATCACCGACC ATAACGTGCG GGAGACGCTC
GGCATCTGCG ACCGCGCATA CATCATCAAC GACGGCCGCG TGCTGACCGC CGGCACGCCC
GAGCACATCA TCCAGGACGA GAACGCACGC AAGTTCTACC TCGGCGAAAA TTTCCGTCTC
TGA
|
|---|
| Protein sequence | MSQISVQGLR KTYGKRTVVH DVSFDVKSGE VVGLLGPNGA GKTTCFYMVV GLVAADGGTV
HLDTHNLTHM AIHQRARLGL SYLPQEPSIF RKMTVEENIL AILELKPYSE EEREEHLDNL
LEDLHIAHLR EASAVSLSGG ERRRVEIARA LAINPRFVLL DEPFAGVDPI AVLDIQKLVH
FLVEREIGVL ITDHNVRETL GICDRAYIIN DGRVLTAGTP EHIIQDENAR KFYLGENFRL
|
|---|
| |