Gene Tbd_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0532 
Symbol 
ID3673783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp557364 
End bp557699 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID637709203 
ProductSSU ribosomal protein S30P / sigma 54 modulation protein 
Protein accessionYP_314290 
Protein GI74316550 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.810549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGA CGATTTCCGG CCATCACCTG GAAGTGACCC CAGCCATCCG CAACTACGTT 
TCCGAGAAGC TCGACCGCGT CAAGCGCCAC TTCGACCACG TCATCAACGT CACCGTGATC
ATGCAGGTCG AAAAACTGGT CCACAAGGTC GAGGCCACGC TGCACGTCAA GGGACATGAT
TTCCATGCCC GCGGCGAAGA CGGCAACATG TACGCCGCGA TCGATTTCCT CGCCGACAAA
CTCGATCGCC AGATCGTCAA GCACAAGGAA AAACTGTCCG AGGTCCATCA GGAAGCTGGC
GGCCTCAAGC ACCAGCCGAC CGAAAACCCG GCCTGA
 
Protein sequence
MNLTISGHHL EVTPAIRNYV SEKLDRVKRH FDHVINVTVI MQVEKLVHKV EATLHVKGHD 
FHARGEDGNM YAAIDFLADK LDRQIVKHKE KLSEVHQEAG GLKHQPTENP A