Gene Tbd_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0526 
Symbol 
ID3673160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp553500 
End bp554117 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID637709197 
Productaromatic acid decarboxylase 
Protein accessionYP_314284 
Protein GI74316544 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.12501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG CCCCCAAGAC CGTCACACTC GCGCTGTCCG GCGCCTCGGG CATGGCCTAC 
GGCCTGCGTC TGCTCGAATG CCTGCTCGCC GCCGACGTCC GCGTCTACCT GCTTTTGTCC
CAGGCGGCGC ACGTCGTCGC CAAGCAGGAA CTCGGCATCG CGCTTCCCGC GCGGCCGTGC
GATCTCGAAG GGCAGCTTCG CGAAAGCCTG TGCGTGGGCG ACGGCCAGTT GCGCGTGTTC
GGACGTGAAG ACTGGAACGC GCCGGTCGCC TCGGGCTCCA ACCCGGCCGA CGCGATGGTC
GTCTGTCCGT GTTCGATGGG CACACTCGCC GCGATCGCGC ACGGCCTTGC GGACAACCTG
ATCGAACGTG CCGCCGACGT GATGCTGAAG GAGCAGAAGA AGCTCGTGCT CGTGCCGCGC
GAGGCGCCGT TTTCCACGCT CCATCTCGAG AACATGCTCG CGCTGTCGCG CATGAATGCC
GTGATCCTGC CGGCCAATCC CGGGTTCTAT CACCGTCCGC GCTCGATCGA GGACGTCGTC
GACTTCATCG TCGCGCGCAT CCTCGACCAG CTCGACATCG CGCACGCCTT GATCCCGCGC
TGGGCCGAAG AGGGGTGA
 
Protein sequence
MHTAPKTVTL ALSGASGMAY GLRLLECLLA ADVRVYLLLS QAAHVVAKQE LGIALPARPC 
DLEGQLRESL CVGDGQLRVF GREDWNAPVA SGSNPADAMV VCPCSMGTLA AIAHGLADNL
IERAADVMLK EQKKLVLVPR EAPFSTLHLE NMLALSRMNA VILPANPGFY HRPRSIEDVV
DFIVARILDQ LDIAHALIPR WAEEG