| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0517 |
|---|
| Symbol | recR |
|---|
| ID | 3673151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 546945 |
|---|
| End bp | 547538 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637709188 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_314275 |
|---|
| Protein GI | 74316535 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.592608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCG CCGCGCTGGA AAGCCTGATC AACGCGCTGC GCGTGTTGCC GGGGGTAGGC
CCCAAGTCAG CGGCGCGCAT GGCCTATCAC CTGCTCCAGC GCGACCGGCG CGGCGCGGAG
ACGCTGGCCG GCGCGCTCGG TCATGCATTG ACCCATCTGC ACCACTGCCG CCTGTGCAAC
AATTTTTCCG AAGCGGAAGT CTGCGAGGTC TGCGCGAGCA CGCGGCGCGA CCGGCGGCAG
CTCGCCGTGG TCGAGATGCC GGCCGACTTC AACATGATGG AAGCCACGCA AAGCTACAAT
GGGCTGTACT TCGTGCTGAT GGGGCGGCTG TCGCCGCTCG ACGGCATCGG GCCGCGCGAG
ATCCATCTCG ACCGCCTGAT CAACCGTGCG CTCGACGGCA CCGTAGAGGA AGTCATACTC
GCGACCAACT TCACGCCCGA GGGTGAGGCG ACCGCCCACA CGATAGGCGA GTTGCTCAAG
GCGCGCGGCC TCAAGGTCAG CCGCCTGGCG CGCGGCGTGC CGGTCGGCGG CGAACTCGAA
TACGTCGACA GCGGCACGCT CGCCCAGGCG GTGCGCGACC GCCGCGCGCT GTAG
|
|---|
| Protein sequence | MQPAALESLI NALRVLPGVG PKSAARMAYH LLQRDRRGAE TLAGALGHAL THLHHCRLCN
NFSEAEVCEV CASTRRDRRQ LAVVEMPADF NMMEATQSYN GLYFVLMGRL SPLDGIGPRE
IHLDRLINRA LDGTVEEVIL ATNFTPEGEA TAHTIGELLK ARGLKVSRLA RGVPVGGELE
YVDSGTLAQA VRDRRAL
|
|---|
| |