Gene Tbd_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0516 
Symbol 
ID3673150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp546602 
End bp546928 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content62% 
IMG OID637709187 
Producthypothetical protein 
Protein accessionYP_314274 
Protein GI74316534 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.384172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG GCGGCATCGG CAACATGATG AAGCAGGTGC AACAGATGCA GGAGAACATG 
GCCAAGATGC AGGCCAAGCT CGCCGAGATC GAAATCGAGG GGCAGAGCGG CGCCGGCATG
GTCAAGGTCA CGATGACCTG CAAATACGAC GTGCGTCGCG TCGCGATCGA CCCGAGCCTG
ATGTCCGACG ACAAGGAAAT GCTCGAGGAC CTCGTCGCGG CGGCCGTCAA CGACGCCGTA
CGCAAGGTCG AGACGACCGT GCAGGAAAAG ATGGCCGGCG TCACCGCCGG CCTGCCGATT
CCACCCGGGA TGAAGCTGCC TTTCTGA
 
Protein sequence
MIKGGIGNMM KQVQQMQENM AKMQAKLAEI EIEGQSGAGM VKVTMTCKYD VRRVAIDPSL 
MSDDKEMLED LVAAAVNDAV RKVETTVQEK MAGVTAGLPI PPGMKLPF