Gene Tbd_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0515 
Symbol 
ID3673149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp544784 
End bp546529 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content71% 
IMG OID637709186 
ProductDNA polymerase subunits gamma and tau 
Protein accessionYP_314273 
Protein GI74316533 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.33811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC TCTTCGGCGA ATCCGCTTCC CCCGCAATGG CGCTGGCGCG CAAATGGCGG 
CCGCGCGCGT TTGCCGATCT GCGCGGCCAG GAGCATGTCG TGCAGGCGCT GTCGAACGCG
CTGACCCAGG GGCGACTGCA TCACGCCTAC CTGCTCACCG GCACGCGCGG CGTCGGCAAG
ACCACGCTGG CGCGGATTCT CGCCAAGTGC CTGAATTGCG AAAGCGGCGT GAGTGCGACG
CCTTGCGGGA CCTGCTCGGC GTGCACCCAG ATCGACGCGG GACGCTTCGT CGACCTGCTC
GAGCTCGACG CGGCGTCGAA CACCGGCGTC GACAACATGC GCGAGGTGCT CGACAACGCG
CAATACGCGC CGACCGTCGG CCGCTACAAG GTCTACATCA TCGACGAAGT GCACATGCTC
TCGAAGCCGG CCTTCAACTC GATGCTGAAG ACGCTTGAAG AACCGCCCGC GCACGTCAAG
TTCATCCTCG CGACGACCGA TCCGCAGAAG ATTCCGGTGA CGGTGCTGTC GCGCTGCCTG
CAGTTCAACC TCAAGCCGAT GACGCCCGCG CTCGTGGCCG GGCACCTCGG TGACGTGCTC
GCCCAGGAGC GCGTCGACGC GGAACCTGCC GCGCTGAACC TGCTCGCGCG CGCGGCCGCC
GGCAGCATGC GCGACGCGCT CTCGCTGACC GACCAGGCGA TCGCCTACGG CGGCGGCAGG
ATCGAGGCGG CAGCGGTCGA GGCGATGCTC GGCACCGTGC GTCGCGATTA TCTGTTCGAC
CTGCTCGACG CGCTGGCGGC GGGTGACGGC GACGCGCTCA TGACGCAGGC GCGCCTGCTC
GCCGAACGCG GCATCGCGTT CGACGCGACG CTGCAGGACC TTGGCAACCT GCTGACCCAA
CTGGCGCTCG TGCTGCACGC GCCGGGCGCC GTCGAGGACG GCGCGGACGC CGAGCGGACA
CGCGCGGCCG CCGAAAAGCT CGACGCCGAA ACGGTTCAGC TCTATTACCA GATCGCGCTG
AACGGCCGCC GCGACCTGCC TTACGCGCCC GACGAGTTTT CCGGGTTCTG CATGACGCTG
CTGCGCATGC TGGCCTTCGC GCCGGCGACC GATCCCACGC CGCGCAGCCC GGGGGGCGGA
CGCGCCCCTG TCGCCTCGGC GGACTCGACG CCGGCCGCTG CCCCCCTCGC CGCACCTGCG
CCGGCCCGCG TCCCGGCCGC AGCGCCAGCG CCTTTGCAGC AACCGGAAGC CGCCCGCCAG
GTGGCCTCCG CTGAGCCGCT CGCAGCCGAG GACGCCGACT CCCCTCGCGC TGCTGCGGCT
CCGCCGGACG CGCCGTTCGT CGCCGCCGAG CCGGCACCCG CTGCGCAATG GGACTGGCTC
GCCGTCGTCG CGGGGCTCCG GCTCGGGGGC ATGGCCAAGA TGCTCGCCGA CCATTGCGAA
CTCGTCGCGC AGACAGGCGA CTCGGTCACG CTGCGGGTCG GCGAAGCGCA CAAGCATCTG
CTCGACCGCG CCTATCAGGA CCGGCTCACT GGCGCGCTGC GCGAGAAGTA CGGGCCGGCG
CTCCAGATCA CCTTCGAGGT CGGCAGCGCG GCAGATCAGA CGCCGCAACA GGTGCGCACG
CGGATCAAGG AAGCGCGCCA GGCCGAAGCC ATCGCCGCGA TCGAGGCGGA CCCGTTCGTG
CGCGAACTGG TCGAGCAGTT CGGCGGCCAG GTCGAGGCTT CAACCATCCA GCCGCTGGCG
CCCTGA
 
Protein sequence
MTDLFGESAS PAMALARKWR PRAFADLRGQ EHVVQALSNA LTQGRLHHAY LLTGTRGVGK 
TTLARILAKC LNCESGVSAT PCGTCSACTQ IDAGRFVDLL ELDAASNTGV DNMREVLDNA
QYAPTVGRYK VYIIDEVHML SKPAFNSMLK TLEEPPAHVK FILATTDPQK IPVTVLSRCL
QFNLKPMTPA LVAGHLGDVL AQERVDAEPA ALNLLARAAA GSMRDALSLT DQAIAYGGGR
IEAAAVEAML GTVRRDYLFD LLDALAAGDG DALMTQARLL AERGIAFDAT LQDLGNLLTQ
LALVLHAPGA VEDGADAERT RAAAEKLDAE TVQLYYQIAL NGRRDLPYAP DEFSGFCMTL
LRMLAFAPAT DPTPRSPGGG RAPVASADST PAAAPLAAPA PARVPAAAPA PLQQPEAARQ
VASAEPLAAE DADSPRAAAA PPDAPFVAAE PAPAAQWDWL AVVAGLRLGG MAKMLADHCE
LVAQTGDSVT LRVGEAHKHL LDRAYQDRLT GALREKYGPA LQITFEVGSA ADQTPQQVRT
RIKEARQAEA IAAIEADPFV RELVEQFGGQ VEASTIQPLA P