Gene Tbd_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0506 
Symbol 
ID3673139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp532077 
End bp532688 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID637709177 
Producthypothetical protein 
Protein accessionYP_314264 
Protein GI74316524 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.40604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.281124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA AAAATACCAA CCGCACTCTC TTATGCAGCC TGATGTTCCC GGCCGCGCTG 
CTGCTCGCCC CGCAGGCCCA AGCACTGGAC CTCACGCCCG ACCTTGCCGG CGCCTGGACC 
TCGCTCGATA CCGACGCGCT GCAGGCCGAC GAGGTCGAAA GCCTGGTCGG TGCCCCTTCC 
GGGTCGCTCG GCCTGGCATA CAAGGTCGAC GTCGAGGGCG GCGCCGAGGA TGGAACCGCC 
ACGGGTTTCT ACGACACCAC GTTCACATTC GAAACCACCG GTGACGCCAC GGGTGCGACG 
ATCACCCAAA GCGGAATGTC AATCATCGAC TGCCCATCGT GCTATCTCGT GGTCAAGGAC 
GGCAACCATC AGCCGGCTCA ATATCTCTTT GATATCAGCG GCTGGAACGG AACTGACGAT 
ATCAACCTGT CCGGGTTCTG GCAGGATCCT GCGCAAGGTG CGATCTCGCA CATCGCGATC 
TGGAACGGCG ACGGTAACGG CGGCGGCGGT GGCGGCGGTG GCGTCGTACC GATTCCGGAG 
GCCGAGACCT ACGCCATGAT GCTCGCCGGG CTGGGCCTGA TCGGCTTCGT CGTGCGTCGC 
CGCAGGGCCT GA
 
Protein sequence
MSLKNTNRTL LCSLMFPAAL LLAPQAQALD LTPDLAGAWT SLDTDALQAD EVESLVGAPS 
GSLGLAYKVD VEGGAEDGTA TGFYDTTFTF ETTGDATGAT ITQSGMSIID CPSCYLVVKD 
GNHQPAQYLF DISGWNGTDD INLSGFWQDP AQGAISHIAI WNGDGNGGGG GGGGVVPIPE 
AETYAMMLAG LGLIGFVVRR RRA