Gene Tbd_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0503 
Symbol 
ID3673136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp525926 
End bp528610 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content70% 
IMG OID637709174 
Productputative glutamate-ammonia-ligase adenylyltransferase 
Protein accessionYP_314261 
Protein GI74316521 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.616937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC CCGCACTGAA ACGGCTTGCC CGCTGCTCGC GTTTCGGCCG CCGCCTGCTC 
GCCGCGCAGC CCGCCCTTGC AGAGGCCCTC GTGCCCATGC TCGAGCGGCC TTTCGGGCGC
GATGCGATGG TGGCTTTTCT GAGCGAGCCG CCGTGCGTCG ACGAGGACAG CCTGCACCGG
CGCCTGCGCC AGTTGCGTCA GCGCGTCTGG CTCGTCACGA CCGCGCGCGA CCTCGCTGGC
AGCGCCGATC TGGGCGAAGT CGTCGCGACC TGGAGCGCGC TCGCCGAAAC GAGCATCGAG
ACTGGACTCG CGTTCCACCA CACGACGCTC GCCGCGCGCC ACGGCGAGCC GCGCGGCGCC
GACGGCGCGC CGCAGCGCAT GGTCGTCGTC GGCATGGGCA AGCTCGGCGG CGGCGAACTC
AACGTCTCGT CCGACATCGA CCTGATCTAT CTCTATCCCG AGGAAGGCGA GACCGCGGCG
GACGGCGACG CCGCGGTGCG CTCGATCAGC AATCACGAAT TCTTCGTCCG CCTCGGGCGC
AAGCTCACCG CGGCGCTCGG CGAGAACACC GCCGACGGCT ACGTCTTCCG CGTCGACCTG
CGGCTGCGGC CATGGGGCGA GTCCGGGCCG TTCGCGATGG GTTTCGATAT GCTCGAGGAC
TATCTCGTCG CGCACGGCAG GCCCTGGGAG CGCTACGCCT GGATCAAGGC ACGGCCGCTG
ACGGGCGGGC ATCACGACGC ACTCGCCGCG GTCGTGCGAC CTTTCGTATT CCGCAAGTAC
CTCGATTTCG AGGCCTTCGC CGCGATCCGC GAGCTGCACG CGCAGATCCG CCGCGAAGTC
GTGCGCCGCG AAATGGCGAC CGACGTCAAG CTCGGTCCCG GCGGCATCCG TGAAATCGAG
TTCACGGCGC AGGTGTTCCA ACTCATACGC GGCGGCCAGA TCCGCACGCT GCAGCAGCGG
CCGACGCTCA CGGTGCTCGG CGAACTCGCG AAAAGCGGGC TGCTCGCGGC CGACGCGCGG
CAGGAACTCG CGGCGGCCTA CGACTTTCTG CGCCGCCTCG AACACCGCAT CCAGTATCTC
GACGACGCGC AGACCCAGCG CCTGCCCGAC GATACCGATT CGCAGGCGAT GCTTGCCGAG
GCGATGGGCG TCGCCGATTA CGGCACGCTC GTTGCCGCGC TCGACCGCCA CCGCAGCCGC
GTGACGCGGC ACTTCGAGCA GGCGTTCGCC GCGCCGCAGA CCGACCAGAT GAGCCATCCG
CTCACCGCCG TGTGCTGTGG CACGGCCGGC GTCGAAGCGG CAACGGCCTT GCTGGAGAAC
GCCGGCTACG ACGATGCCGC GCAGGTGCTG GCGACGCTCG AGGCCTTGCG CGAGGCGAGC
GCGCGGCTGC CCGAATCGAC CCAGTTGCGG CTGAACGCGC TGCTGCCGCC GGCACTCGAA
GTCATCGGCA GCCAGCGCGA CCCGCAGGCC ACGCTCGAGC GTTTCGCGCG GCTGGTGCAA
TCGATCGCGC GCCGCGCCAC CTACCTCGCC CTGCTCGCCG AATATCCGGC CGCGCTACGC
CAGCTCGTAC GGCTGCTGGC CGCGAGCCCC TGGGCCGCGC AGCTCATCAC GCGGCAACCG
CAACTGCTCG ACGAGCTGAT CGCGCCGCAG TCGCTGCTGG CGCTGCCCGA CTGGCCCACG
CTCGCCGCGC AGCTGCGCGA CGAGCTCGAC GCCCAGCCGA ACGACACCGA GGCGCAGATG
GACGCGTTGC GCCGCTTCAA GCAGGTGCAA ACGCTGCGCC TGCTGGCGCA GGACGTCGCC
GGGCGCCTGA CCCTCGAAGC GCTGTCGGAT CACCTGTCGT ATCTGGCCGA CACGCTGCTC
GCCGAAACAC TCGGCCGCTG CTGGGCAGGC CTCAAGTCAC GTCACCGCGA CGCGCCGCGC
TTCGCCGTCG TCGGTTACGG CAAGCTCGGC GGCAAGGAGC TCGGTTACGC GTCCGATCTC
GACCTGGTGT TCCTCTACGA CGACGCCGAC CCGCGCGCAC AGGAAACCTA TGCACGGCTC
GCGCAGCGCA TCAACACCTG GCTCGGCACG CTTACGTCGG CCGGCATCCT CTACGAAACC
GACCTCAGGC TGCGCCCTGA CGGCGCCTCG GGGCTGCTCG TCAGTTCGAT GGCGGCGTTC
CGCGATTACC AGTTGCAGCA CGCCTGGGTA TGGGAGCATC AGGCGCTGAC GCGGGCGCGC
TTCGTCTGCG GCGACGGCGA AATCGGCGCG CGCTTCGAGA CCTTGCGCCG CGAAGTGCTG
TGCCTGCCCC GCGACGCGGA GGCGCTGCGC GCCGAGGTCC GCGCGATGCG CGAGAAAATG
CACGCGGGTC ACGTCAACGC GAGCGAACTG TTCGACCTCA AGCACGACCG CGGCGGCATC
GTCGACGTCG AATTCTGCGT GCAATACCTC GTGCTGCGGC ACAGCGCGGC GCATCCCGAA
ATGGCCGACA ACGTGGGCAA TATCGCGCTG CTCCTGCGCG CCGGCGCGGC CGGCCTCGTT
CCAGCGACGC TCGCGCAGGG CGCGGCCGAT GCCTACCGCG AACTGCGGCG CCAGCAGCAC
GCGATCAAGC TGAGCGGCGC CGAGTACGCG CGGGTTCCTC CGGGCGATCT CGAAGCGGTG
CGCGCGGCGG TGTCGGCCCT GCGCGCCGAA GTGCTGGGCG GCTGA
 
Protein sequence
MSNPALKRLA RCSRFGRRLL AAQPALAEAL VPMLERPFGR DAMVAFLSEP PCVDEDSLHR 
RLRQLRQRVW LVTTARDLAG SADLGEVVAT WSALAETSIE TGLAFHHTTL AARHGEPRGA
DGAPQRMVVV GMGKLGGGEL NVSSDIDLIY LYPEEGETAA DGDAAVRSIS NHEFFVRLGR
KLTAALGENT ADGYVFRVDL RLRPWGESGP FAMGFDMLED YLVAHGRPWE RYAWIKARPL
TGGHHDALAA VVRPFVFRKY LDFEAFAAIR ELHAQIRREV VRREMATDVK LGPGGIREIE
FTAQVFQLIR GGQIRTLQQR PTLTVLGELA KSGLLAADAR QELAAAYDFL RRLEHRIQYL
DDAQTQRLPD DTDSQAMLAE AMGVADYGTL VAALDRHRSR VTRHFEQAFA APQTDQMSHP
LTAVCCGTAG VEAATALLEN AGYDDAAQVL ATLEALREAS ARLPESTQLR LNALLPPALE
VIGSQRDPQA TLERFARLVQ SIARRATYLA LLAEYPAALR QLVRLLAASP WAAQLITRQP
QLLDELIAPQ SLLALPDWPT LAAQLRDELD AQPNDTEAQM DALRRFKQVQ TLRLLAQDVA
GRLTLEALSD HLSYLADTLL AETLGRCWAG LKSRHRDAPR FAVVGYGKLG GKELGYASDL
DLVFLYDDAD PRAQETYARL AQRINTWLGT LTSAGILYET DLRLRPDGAS GLLVSSMAAF
RDYQLQHAWV WEHQALTRAR FVCGDGEIGA RFETLRREVL CLPRDAEALR AEVRAMREKM
HAGHVNASEL FDLKHDRGGI VDVEFCVQYL VLRHSAAHPE MADNVGNIAL LLRAGAAGLV
PATLAQGAAD AYRELRRQQH AIKLSGAEYA RVPPGDLEAV RAAVSALRAE VLGG