Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0502 |
Symbol | |
ID | 3673135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 523256 |
End bp | 525898 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709173 |
Product | cation-transporting ATPase, E1-E2 type |
Protein accession | YP_314260 |
Protein GI | 74316520 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.61983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTG ACGCAGACAC CGCCCGCCAG GCCTGGCATC GCCTCGACAC CGAGGCCGCG GCCGCGCAGT TCGACAGCGA CCTGAACCGG GGGCTCTCGG CGCAGGTGGC CGCCCAGCGT CTGGCGCAAC AGGGCCCCAA CGCGCTCCAG GAGGGCGGCC GTCGCCACCC GTTGGCGATG CTCGCCTCGC AGTTCACCGA TTTCATGATC CTGGTGCTGA TCGCCGCCGC CGTGATCGCG GGCATCGTTG GCGAGCCGGA GGACACGATC GCGATCGTCG TCATCGTGTT CCTCAACGGC ATCATCGGCT TCGTCCAGGA ATATCGCGCC GAGCGTGCGA TGGCCGCGCT GAAGAAGATG AGCAGCCCGC AGGCGCGCGT GATCCGCGAC GGCCAGGCGG CCTGGATCGA CGCGCGCGAA CTCGTGCCGG GCGACGTCGT CGAGCTCGAA GCCGGCAACA TCGTTCCCGC CGACCTGCGG CTGATCGAGC TCTCCGCGTT CAAGGTCGAC GAATCGGCGT TGACAGGCGA GTCGCAGGCG GTCGAGAAGC AGCACGCGCA ACTGAGCGAG GTCGAGCTGC CGCTCGGCGA CCGGCTCAAC CTCGCGTACA AGGGCACGGT CGCGACCTAC GGCCGGGCGC GCGGGCTCGT CGTCGCCACC GGCATGCAGA CCGAGCTGGG CAGGATCGCG ACGCTGCTGG CGGGCGAAGC GGGCAAGACG CCGCTGCAGA AGCGCCTGGC GCGTTTCGGC CAGCATCTGG CGCTCGTCGT GCTCGCGATC TGCGCGATCA TCTTCGTCGC CGGCTGGCTG CGCGGCGAGC CGCCGCTGGT GATGCTGCTG ACCGCGGTCA GTCTTGCGGT CGCCGCGATC CCCGAGGCGC TGCCGGCCGT CGTGACGATC TCGCTCGCGC TCGGCGCCGC GCGCATGGTG CGGCAGAACG CGCTGATCCG GCGGCTGCCC GCGGTCGAGA CGCTCGGCTC GGTCACCTAT ATCTGCTCGG ACAAGACCGG CACGCTGACC GAAAACCGGA TGCGCGTCGA CCGCCTGCAG GCCGCCGGCG AGACGCGACC GGGATTGCAG GAGGACGGCG GGGCGCCGTG GCACGAGCTC GGGCTCGCGA TGGCGCTATG CAACGACGCC GTCGCCGACG CCGACGGCAG CCTGAGCGGC GACCCGACCG AGACGGCGCT GCTCGACGCG GTGCTGTCGG CTGGCCTCGA TCTCGCGGCG CTGCGTCAGG CGCTGCCGCG CGAGGGCGAG CTTCCGTTCG ACTCGGAGCG TGCGCGCATG AGCACCGTGC ATCGCGAAGG CGAGGGCGCG CTCGTGCTCG TGAAAGGCGC CCCCGAGAGC CTGCTGCCGC GCTGCGTCGA TGGGCTCGGA CCGTCAGGGC GCGCACCGAT CGACACGGAC GCGCTGCACG ACGAGGCCGA AAGGCTCGCC GCGGACGGCT TGCGCGTCCT CGCCTTCGCG CTCAGGCGCT TGCCACGCAT GCCGGACACG CTCGACGTCG ACACGCTCGA ATCGGGACTG AGCTTCGTCG GACTGGCCGG GCTGATCGAC CCGCCCCGTC CCGAAGCGGC CGAGTCGGTT GCGGCGTGCA AGGCCGCCGG CATCATCCCG GTCATGATCA CCGGCGACCA TCCGGCGACC GCGCGCGCGA TCGCGAGCCG GCTCGGCATC ATCGACGCCG ACGCCAAGGT GCTGACCGGT GCCGAACTCG CGAAGCTCAC GCTTGCGGAG TTCGAGCGCG AAGTCGATAC CGTGCGCGTC TACGCGCGCA TCAACCCCGA GCAGAAGATC AAGATCGTGC AGGCCTTGCA GGACAAAGGC GAGTTCGTCG CGATGACCGG CGACGGCGTC AACGACGCGC CGGCGCTGAA GATGGCCGAC ATCGGCGTCG CGATGGGCAA GGGCGGCACC GACGTCGCGC GTGAAGCCGC GCACATGACG CTGCTCGACG ACAATTTCGC GACCATCGTG CACGCCGTGC GCGAAGGGCG GCGCATCTTC GACAACATCC GCAAATTCGT CAAATACACG ATGACGAGCA ATTCGGGCGA GATCTGGACC ATCTTTCTCG CGCCGTTCAT GGGCCTGCCG ATCCCGCTGC TGCCGATCCA CATCCTTTGG ATCAATCTCG TGACCGACGG CCTGCCCGGG CTCGCGCTCG CCAACGAGCG GGCCGAGCGC GACGTCATGG CGCGGCCGCC GCGTCCGCCG AAGGAAAGCA TCTTCGCCCA CGGCATGTGG CAGCACATCC TGTGGGTCGG CCTGCTGATG GGCGGCGTGT CGCTACTGAC CCAGGCGTGG GCGATCCACA CCGAATCGGC GCACTGGCAG AGCATGGTGT TCACGGTGCT GACGCTGTCG CAGCTCGGCC ACGTGCTCGC GATCCGCTCC GAGCGTGAAT CCCTGTTCCG CCACGGCGTG TTCTCCAACC GCATGCTGAT CGCCGCGCTC GCAGTGACCT TCGCGCTGCA GATGGCCGTG CTCTATGTGC CCTGGCTCAA CCCGATCTTC AGGACCGCGC CGCTGAGCGC GGGCGAGCTC GGTGCCTGTC TCGCGCTGTC GTCGGTCGTT TTCATCGGCG TCGAGATCGA GAAGTGGCTG GTGCGCCGGG GCTGGCTCTA CGGCGGAAAT TGA
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Protein sequence | MDTDADTARQ AWHRLDTEAA AAQFDSDLNR GLSAQVAAQR LAQQGPNALQ EGGRRHPLAM LASQFTDFMI LVLIAAAVIA GIVGEPEDTI AIVVIVFLNG IIGFVQEYRA ERAMAALKKM SSPQARVIRD GQAAWIDARE LVPGDVVELE AGNIVPADLR LIELSAFKVD ESALTGESQA VEKQHAQLSE VELPLGDRLN LAYKGTVATY GRARGLVVAT GMQTELGRIA TLLAGEAGKT PLQKRLARFG QHLALVVLAI CAIIFVAGWL RGEPPLVMLL TAVSLAVAAI PEALPAVVTI SLALGAARMV RQNALIRRLP AVETLGSVTY ICSDKTGTLT ENRMRVDRLQ AAGETRPGLQ EDGGAPWHEL GLAMALCNDA VADADGSLSG DPTETALLDA VLSAGLDLAA LRQALPREGE LPFDSERARM STVHREGEGA LVLVKGAPES LLPRCVDGLG PSGRAPIDTD ALHDEAERLA ADGLRVLAFA LRRLPRMPDT LDVDTLESGL SFVGLAGLID PPRPEAAESV AACKAAGIIP VMITGDHPAT ARAIASRLGI IDADAKVLTG AELAKLTLAE FEREVDTVRV YARINPEQKI KIVQALQDKG EFVAMTGDGV NDAPALKMAD IGVAMGKGGT DVAREAAHMT LLDDNFATIV HAVREGRRIF DNIRKFVKYT MTSNSGEIWT IFLAPFMGLP IPLLPIHILW INLVTDGLPG LALANERAER DVMARPPRPP KESIFAHGMW QHILWVGLLM GGVSLLTQAW AIHTESAHWQ SMVFTVLTLS QLGHVLAIRS ERESLFRHGV FSNRMLIAAL AVTFALQMAV LYVPWLNPIF RTAPLSAGEL GACLALSSVV FIGVEIEKWL VRRGWLYGGN
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