| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0500 |
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| Symbol | |
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| ID | 3673133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 520273 |
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| End bp | 522009 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709171 |
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| Product | sodium/hydrogen exchanger family protein |
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| Protein accession | YP_314258 |
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| Protein GI | 74316518 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.76767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA TCAACCAGCT CGTACTCGCG GGCGCGGTCC TGCTGCTCGT GGCCGTGCTC
GCAAGCGCAC TCTCCTACCG CATCGGCATG CCGCTGCTGC TGGTGTTTCT CGCCGTCGGC
ATGCTGGCGG GCGAGGACGG CCCGGGCGGA ATCGTATTCA ACCACAGCGG CTTCGCCTAC
ATGGCCGGCA GCGTCGCGCT TGCCGTCATC CTGCTCGACG GCGGACTCAA TACGCGGGCG
GAAAGTTTCA GGGGCAGCCT GCGCCCGGCC GCGACGCTCG CGACCGCCGG CGTCGTGATC
ACCTGCGTGG TCACCGGGTT CTTCGCCGCC TGGGTGCTCG ACTTCAGCTA TCTGCAAGGC
ATGCTCGTCG GCGCGGTGGT CGGATCGACC GACGCCGCCG CGGTATTCGC GCTGTTGCGC
GCCAAGGGCC TCACGCTCAA GGAGCGCCTG GCGGCGACGC TCGAAATCGA ATCCGGCAGC
AACGATCCGA TGGCAGCCCT GCTCACGCTC GCCTTCATCG CCTTGATCAC CGCGGGACGC
TCGACCCCGG GCTGGGAAAC GCTCGCACTG CTGATTCAGC AGTTGGGCCT TGGCCTGATC
GCCGGGCTCG GCGGCGGGGC ACTGCTCGTC TGGTTGACCA ACCGGCTGCG GCTCGAACGC
GGCATGTATC CGATGATGAT TCTGGCCGGC GGGCTGCTGT CCTACAGTCT TACGACGGTA
CTCGGCGGAA GCGGCTTTCT TGCGATCTAC TTGTGCGGCG TCGTCGTCAG CAACCGCAAT
CCGCGGGAGG CGAGCAACAT CCTGCAGGTG CACGATGGCC TGGCATGGCT CGCGCAGATA
GGCATGTTCC TGATGCTCGG GTTACTGGCG TCGCCGCACG AGCTCGTCGA CAACGCCGCG
GCGGGGCTGG CTATCGCGCT GGTGCTGATG CTGGTCGCAC GACCCGTGGC GGTCGGGCTT
TGCCTGCTGC CCTTCCGTTT TTCCGGGCGC GAGCAGATTT TCATCGCCTG GGTCGGCCTG
CGCGGCGCCG TGCCCATCGT TCTTGCCTTG TTTCCGCTGC TCGCCGGCAT CCCGGAGGCG
TCGCTGATTC TCGATGTCGC CTTCTTCGTC GTGCTGATTT CGCTGACCGT ACAGGGCTGG
ACGATCCCCT TGTTCGCACG CTTGCTGCAG CTCGAGGTGC CGCCCGCCCC CGAGCCGAAC
GAACGACACG ACCTGGAAGC GAGCGCGGAG AGCGGGCACG CTTTCCTCGG GTTCAAGCTG
CCGCCCAATT CCACGCTCAT TGGCCAGCCT GCCAATGCCC TCTGGCTTCC CGGCGCTGCC
CGCCCGGTCG CGATCGCGCG CGGAAACGAG ACGCTGACGC CCGAGATCGC CGGCAGGCTG
CTTCCCGGCG ACACCCTGTA CCTGCTCGCG CCGAGCGCCG ACTGCGACAC ACTGAGCGAG
CTCCTGGTCG CGCCGGTCGC GCCGCCCCAC CTCGAGCGAC GCCATTTCTA CGGGGTCTTC
GTTCTGCATG GCGACGCGTC GATGGCAGCC GTAGCCGGCC AGTACGACCT GCCCTTGCCC
GCGGGGGCGG CAGAGCTGAC GCTCGCGCAA TTCCTCACGC GGACGCTGCG CCGTCATCCA
GGCCCGGGCG ACCGCGTGCG CCTCGGCAAA CTCGAGTTCG TCGTGCGCAC CGTCGTCAAA
GGCCGTATCA CCCGGGTCGG TCTACGCATC CCGACGCAAC TCGATCGCAA GCGCTGA
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| Protein sequence | MELINQLVLA GAVLLLVAVL ASALSYRIGM PLLLVFLAVG MLAGEDGPGG IVFNHSGFAY
MAGSVALAVI LLDGGLNTRA ESFRGSLRPA ATLATAGVVI TCVVTGFFAA WVLDFSYLQG
MLVGAVVGST DAAAVFALLR AKGLTLKERL AATLEIESGS NDPMAALLTL AFIALITAGR
STPGWETLAL LIQQLGLGLI AGLGGGALLV WLTNRLRLER GMYPMMILAG GLLSYSLTTV
LGGSGFLAIY LCGVVVSNRN PREASNILQV HDGLAWLAQI GMFLMLGLLA SPHELVDNAA
AGLAIALVLM LVARPVAVGL CLLPFRFSGR EQIFIAWVGL RGAVPIVLAL FPLLAGIPEA
SLILDVAFFV VLISLTVQGW TIPLFARLLQ LEVPPAPEPN ERHDLEASAE SGHAFLGFKL
PPNSTLIGQP ANALWLPGAA RPVAIARGNE TLTPEIAGRL LPGDTLYLLA PSADCDTLSE
LLVAPVAPPH LERRHFYGVF VLHGDASMAA VAGQYDLPLP AGAAELTLAQ FLTRTLRRHP
GPGDRVRLGK LEFVVRTVVK GRITRVGLRI PTQLDRKR
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