| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0498 |
|---|
| Symbol | |
|---|
| ID | 3673131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 517334 |
|---|
| End bp | 518845 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637709169 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_314256 |
|---|
| Protein GI | 74316516 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACA CTTTGTGGAT GGCGGCAGCG CCCGTCGGAG GCCCCGGGCG CGGCTCACAT
CGCGGCCGGG CCGATGCGCG GTCGCGGTGC ATCGTCATTC CGAGAGGAGA CAGAATGGCT
TGGGTTGAGC GGGACGTCGT CGCGTTGGTC GACGACTGCG TGCACGGCGA GATTCATCGG
TTTCTCTGCG CGGAGGGCTG GCGCGTGCAT CGCGCGACGG GGCTTCAGGA CCTCGCGAAG
CAGCTTCAAG GCCATACCTT CCACGCCGGT CTGGTGCAAC TTCAGCGCGC CGGCAACAAC
CGTCTCTTCG AGCTCGTGGG CCGGCAGCGG TCCCTGCAAT GGATCGCGCT GTCCGACCCG
GCTTTCTGGC GGCCCGGCCC CCAGCATCGC AACTTTCTCG CCGGCGTCTA CGACTTCCAT
TCCCTGCCGG TCGACAGCCA GCGGCTCGCG ATCTCGCTCG GTCATGCCTG GGGCAAGGGG
CAGCTGCTCC AGCACCCGGA GGCGCCGTTC GAGACCCTCG AGGAATACGG CATCGTCGGC
AGCAGCCCGG CAATGCTGAG CTTCGCTCAC ATGCTGCGCA AGGCGAGCAA GACCGACGCA
CCGGTACTGA TCGCCGGCGA GAGCGGAACC GGCAAGGAAC TCGCCGCACG CGCGATCCAC
GATATGTCTT CGCGTGCGCG AAAACCCTTC GTCGCGGTCA ACTGCGGGGC GCTTCCTCCC
CATCTGATCC AGAGCGAACT GTTCGGCCAC GAGAAGGGCG CGTTCACCGG CGCTCACCAG
CGCAAGATCG GCCGCATCGA AGCGGCCGAC GGCGGCACGC TCTTCCTCGA CGAGATCGCC
GACCTGCCGC TCAGCCTGCA GGCCAATCTG CTGCGCGTGC TGCAGGACAA GGTGATCGAG
CGCCTGGGGT CGACGCAGTC GGTGCAGCTC GACATCCGCG TCCTTGCCGC ATCGCACGTC
GACCTACTGG ACGCCGTGGC GAAAGACCTG TTCCGCGAAG ACCTCTACTA CCGGCTCAAC
GTCGTCAAAC TCGTCGTCCC GCCGCTGCGC GACCGGCACG GCGACATCGA GCTGCTCGCG
CAGGCGCTGC TCGACAAGTT TTCATGGGAG ACGCTCGGCA AGGTCAAGGG CTTCAGCCAG
CAGGCGCTGC GCGCGATGAA CCAGTACGCG TGGCCGGGCA ACGTCCGCGA GATGGTCAAC
CGCATCCGGC AGGGCATCAT CATGGCCGAA CACCCCTATC TGACGCCGGA GGATCTTGGA
ATGGAAAGAC GCGCCGCCTG CGCACCGGGC CTCACGCTCG ACGGCGCGCG CGCCAAGGCC
GAAGCCGATG CGATCCGCTC GGCCCTGCGC CGCTGCCAGC ACAACGTCTC GGAAGCCGCC
CGCGAGCTCG GCGTCTCGCG CGCGACGATG TACCGCCTGC TCGAACGCCA CGCCCTGATC
GGGCCCTCTC TTCGCGCGAC GCCACCCGAA GCGCTGCACA CGCTCGCGGG AGCCACGGAA
CGCAACGCCT GA
|
|---|
| Protein sequence | MSYTLWMAAA PVGGPGRGSH RGRADARSRC IVIPRGDRMA WVERDVVALV DDCVHGEIHR
FLCAEGWRVH RATGLQDLAK QLQGHTFHAG LVQLQRAGNN RLFELVGRQR SLQWIALSDP
AFWRPGPQHR NFLAGVYDFH SLPVDSQRLA ISLGHAWGKG QLLQHPEAPF ETLEEYGIVG
SSPAMLSFAH MLRKASKTDA PVLIAGESGT GKELAARAIH DMSSRARKPF VAVNCGALPP
HLIQSELFGH EKGAFTGAHQ RKIGRIEAAD GGTLFLDEIA DLPLSLQANL LRVLQDKVIE
RLGSTQSVQL DIRVLAASHV DLLDAVAKDL FREDLYYRLN VVKLVVPPLR DRHGDIELLA
QALLDKFSWE TLGKVKGFSQ QALRAMNQYA WPGNVREMVN RIRQGIIMAE HPYLTPEDLG
MERRAACAPG LTLDGARAKA EADAIRSALR RCQHNVSEAA RELGVSRATM YRLLERHALI
GPSLRATPPE ALHTLAGATE RNA
|
|---|
| |