Gene Tbd_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0494 
Symbol 
ID3673127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp512055 
End bp512546 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID637709165 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_314252 
Protein GI74316512 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCC TGCTGCCGCA CCCGCTGCTG ACACTCGCGC TGGCCCTGCT CTGGTTGCTG 
CTGGTCAACG ACTTCTCGGC CGGCCATGCG GTGCTCGGCG CGCTGCTCGG CTGGCTGATC
CCGTTCGCGA CCGCATCGCT GTGGGCGCAA TCGGTCCGCG TGCGCAACGT GCCGGTGCTG
CTGCGCTACC TCGTCGTCGT CATGTACGAC ATCGTCGTCG GCAGCGTGCG CGTCGCGCGG
CTGATCCTCG GCCGGCCGTC GAGCCTGCGC CCGGCCTTCA TCACCATCCC GCTGGAACTC
GAAACCGATC TTGCGATCAG CCTGCTGGCC AACACCATTT CGCTCACGCC CGGCACCGTG
TCGGTCCTCG TGAGCGCGGA TCGCCGCACG CTCACGGTCC ACAGCCTCGA CACGGCGGAC
GCCGCGGCCA TGGTCGCCGA GATCAAACAC CGCTACGAGG CGCCGCTGAA GGCGATTTTC
GAATCATGCT GA
 
Protein sequence
MRRLLPHPLL TLALALLWLL LVNDFSAGHA VLGALLGWLI PFATASLWAQ SVRVRNVPVL 
LRYLVVVMYD IVVGSVRVAR LILGRPSSLR PAFITIPLEL ETDLAISLLA NTISLTPGTV
SVLVSADRRT LTVHSLDTAD AAAMVAEIKH RYEAPLKAIF ESC