| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0487 |
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| Symbol | |
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| ID | 3673120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 506550 |
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| End bp | 507641 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709158 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_314245 |
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| Protein GI | 74316505 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.468611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCG ACCGTAACGC TGTCGATCTG GAATTGCAGC AGTGTCACAT CCGGCTCTTC
GTTCCGCTGC CGATCCTGTT TGCGTGGTAT CTGTTTTGGA CGGTGAAGGG GCACCCGCAG
GCGAGCAACG GGCTGGCGGT CGCCGGCGCG TTCCTGGTCT TCGCATTCGT GCATTGGCTG
CGTGTCAGGA CGAACCCCGG GCCTTATCCC GGTCGCCAGT TCACGGCAAT TGCGGTTGAT
CAGACGGCCT GCATGATTGG CATGATCCTC ACGGGCGAAC TCGGTGCAAT CATCGCCTTC
GTGAATCTGT GGATATCCCT GGGGAATGGC ATCCGCTTCG GGGTGAAATG GATGGCATTG
TCGGCCTTGT TCGCGACGAC GGGCCTGATT GCAGTGGGCC TGCTGTCGGA CTATTGGACG
CAGCATCCGA TCTGGATATT CAGCCTGCTA TTGCTCAACG TCGCCATCCC CGCCTACGTC
GCGAGCCTGA TCCGCGGATA CCACGAAAGT CGGGCCCAGC TTGCGCGCTA TGCGGGAGAG
ATGGAGGAGA TTGCGCTGAC CGACACGCTC ACCGGTCTGC CCAACCGGGC GGCGTTTTTT
TCCCAGTTGC AGAAGGCGGT TTCGCATGCC CAGCGTACGC AGTCTTCCAT TGCCCTTCTC
TATTTCGACC TCGACGGCTT CAAGCAGGTG AACGACAGCC TCGGGCATGC GCACGGGGAC
AGCTTGTTGA AGCAGACGGC CCTGCGCGTC GGGCAGTGTT TGCGCGGAGA AGACGTGCTT
GCCCGTCTCG GTGGCGACGA ATTCGTCGTG CTGCTCAACG CCCAGGACAA GGAAAAGCGC
GTGGAAAAGG TCGCGGCGCG GATTCTTCAG GCCGTCGCGT CGATCGATCA GGTCGACGGC
CACCGCGTCG AGGTCACGGC GTCGGCCGGG ATCGTCCTCG TCAGCGGCGC GCACGCCGCC
GCACTCGGAT CGGAAGGCAT GATCCACGAG GCGGACAAGA ACATGTACGC CGCGAAAAAA
AAGGGCAAGA ACCAGACCGT CCTGTCGTCT TTTCCTGCCG AACTCCGCCT CGTCGCCGGC
CTCGACCGCT GA
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| Protein sequence | MHPDRNAVDL ELQQCHIRLF VPLPILFAWY LFWTVKGHPQ ASNGLAVAGA FLVFAFVHWL
RVRTNPGPYP GRQFTAIAVD QTACMIGMIL TGELGAIIAF VNLWISLGNG IRFGVKWMAL
SALFATTGLI AVGLLSDYWT QHPIWIFSLL LLNVAIPAYV ASLIRGYHES RAQLARYAGE
MEEIALTDTL TGLPNRAAFF SQLQKAVSHA QRTQSSIALL YFDLDGFKQV NDSLGHAHGD
SLLKQTALRV GQCLRGEDVL ARLGGDEFVV LLNAQDKEKR VEKVAARILQ AVASIDQVDG
HRVEVTASAG IVLVSGAHAA ALGSEGMIHE ADKNMYAAKK KGKNQTVLSS FPAELRLVAG
LDR
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