Gene Tbd_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0482 
Symbol 
ID3673115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp503804 
End bp504445 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID637709153 
ProductTetR family transcriptional regulator 
Protein accessionYP_314240 
Protein GI74316500 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGATC AAGTCATGCA TGCCTCCGCC AAGACGCCCG ACCTCACGCG CCAGACGCTG 
CTCGAAGCGG CCTTTGCCGA GATTCATCGC AACGGCTTCC AGGCTGCGTC GCTCGCGCAG
ATCCTCGGCG ACACGGGGCT GACCAAGGGC GCGCTCTATC ATCACTTCCC CGACAAGAAA
GCCCTTGGCC TCGCGGTCGT CGACGAAGTG ATCCGGCCGC ACCTCGCGGC GATGATGTTC
GCGCCGCTCG AGGAAACCGA CCGGCCGCTC GAGGCGATGC AGGCCTTGCT TGCCGCGAAG
GCGGCCGAGG ACGACCCCGC GGTCGTTGCC TTGGGCTGTC CGCTCAACAA CCTGATGCAG
GAGATGAGCC CGGTCGACGA GGACTTCCGC CTGCGTCTGA ATCGGGTGTT CGAAGCTTGG
GTCGCGGTGC TCGCCGCAGC GCTCGGGCGC GGCCTCGGGG CAGGCCACGT GCGCGCCGAC
GTCGATCCCG CGGCCACCGC ATTTTTCATC GTGTCGGCGC TGGAAGGCTG CGTCGGCATG
AGCAAGAACA CGCAGTCGGT CGCGGCTTAC CGCAACTGCC TCGGGCAGTT GGCCCATTTC
CTCGATACGC TGAAACCCGC GACCCATGCA CCCGATCGCT GA
 
Protein sequence
MYDQVMHASA KTPDLTRQTL LEAAFAEIHR NGFQAASLAQ ILGDTGLTKG ALYHHFPDKK 
ALGLAVVDEV IRPHLAAMMF APLEETDRPL EAMQALLAAK AAEDDPAVVA LGCPLNNLMQ
EMSPVDEDFR LRLNRVFEAW VAVLAAALGR GLGAGHVRAD VDPAATAFFI VSALEGCVGM
SKNTQSVAAY RNCLGQLAHF LDTLKPATHA PDR