Gene Tbd_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0470 
Symbol 
ID3673103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp493276 
End bp493656 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID637709141 
Productendoribonuclease L-PSP 
Protein accessionYP_314228 
Protein GI74316488 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.720081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC GCATCATCCA GACCGCCGAC GCCCCCGCCG CGATCGGTAC CTACTCGCAG 
GCAATCCGCG TGGACAACAC CGTGTACCTG TCGGGGCAGA TCGGGCTCGA TCCGTCGACC
ATGCAACTGG TCGACGGCAT CGAAGCGCAG ATCCATCAGG TGTTCAAAAA TCTCGCCGCG
GTCGCCGCGG CGGCCGGCGG CTCGCTCGCC GACGTGGTGA AGCTCAACGT CTTCCTCACC
GACCTCGGAA ACTTTTCGCA GGTCAACGAG ATCATGGCGG CCTACTTCAA GGCCCCCTAC
CCGGCGCGGG CTGCGGTCGG CGTCGCTGCC CTGCCGCGCG GCGCACTGGT CGAGGCCGAC
GCCGTCATGG CCCTTGCCTA G
 
Protein sequence
MDKRIIQTAD APAAIGTYSQ AIRVDNTVYL SGQIGLDPST MQLVDGIEAQ IHQVFKNLAA 
VAAAAGGSLA DVVKLNVFLT DLGNFSQVNE IMAAYFKAPY PARAAVGVAA LPRGALVEAD
AVMALA