| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0466 |
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| Symbol | |
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| ID | 3673099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 488477 |
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| End bp | 489484 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709137 |
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| Product | periplasmic C4-dicarboxylate binding protein DctP |
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| Protein accession | YP_314224 |
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| Protein GI | 74316484 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.264672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGATAC GAAATGTCGT CCTGTTCGTG GGTGCCTTCT TCGCCGCGAC CAGCAGCCAC
GCCGCCGACG CCTACGTCCT CAAGTTCGCG ACGCTCGCGC CGGCCGGCTC GACCTGGATG
AAGGCCTTCG ACGCTTGGGG CAAGGAACTC GCGCGCGCGA GCCAGGGGCG GCTGGTCGTG
AAGTTCTACC CGGGCGGCAT CGCGGGCGAC GAACCCGACA TGCTGAAGAA GATACGCTTC
GGCCAGTTGC AGGGCGCGGC GCTCGCGGGT CACGGCATCG GCGAGATTTT TCCCCCGGCG
CGTATCCTCG AAGCGCCCTT CCTGTTTCGT GATCATGCCG AGATCGACGC GGTCCGTGCC
CGCGTGCTGC CCGCGATCGA AAAAGGCTTT CGCGACAATC AATACGAGTT GCTCGCCTGG
ATGGAAGTCG GCAACGTGCA CTTCTTCTCG ACCAGGCCGC TCGCGAACCT CGACGAGCTC
GCGCGCCGCC GCATCTGGCA GTGGCAGGGC GACCGCTTCA TCGCCGCATT TTTCGACGCC
AACGGCTGGG CGGCCGTGGC GCTGCCGATC ACCGAAGTCT ACCCGGCGCT CGCGACGGGA
CTCGTCGACA CCGTCGTGAG CACGCCCCTC GCGAGCATCG CCCTGCAATG GTCGGGGAAG
ACGCCCTATA TGAGCACGCG CGCGATGGCA ACCGGAATCG GCGCCGTGGT CGTCTCGCGC
AAGTTCTTCG GCGGTCTGCC TGCCGACTTG CAGGCCTTGC TGAAACGTAC GGGCGGCCCG
TTATCGCAAA GGCTGATCGC CGACACCCGG CGCGACGACA GCAAAGCGCT CGCGCTGCTG
GCCCGCCGCA CGCAGCCGAT GACGGCGTTC CAGCAGGTCG ACCTCGCGGC GCAGGCCGCG
CGTGCACGCA AGACCGTCGA GGCGCTCGAA GCGGCGCGTT ACCTCTCCGC CGAACTCGAC
CGCCAGGTGG ACACCGCGCT CGCCGACCAC CGCCGCGGCG CGGACTGA
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| Protein sequence | MRIRNVVLFV GAFFAATSSH AADAYVLKFA TLAPAGSTWM KAFDAWGKEL ARASQGRLVV
KFYPGGIAGD EPDMLKKIRF GQLQGAALAG HGIGEIFPPA RILEAPFLFR DHAEIDAVRA
RVLPAIEKGF RDNQYELLAW MEVGNVHFFS TRPLANLDEL ARRRIWQWQG DRFIAAFFDA
NGWAAVALPI TEVYPALATG LVDTVVSTPL ASIALQWSGK TPYMSTRAMA TGIGAVVVSR
KFFGGLPADL QALLKRTGGP LSQRLIADTR RDDSKALALL ARRTQPMTAF QQVDLAAQAA
RARKTVEALE AARYLSAELD RQVDTALADH RRGAD
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