Gene Tbd_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0463 
Symbol 
ID3673096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp486065 
End bp486946 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID637709134 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionYP_314221 
Protein GI74316481 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTA CCGAGCGTCT CTCGCTTTAC GAAAAACTGG CGCGGCTGGA CAAGCCGATC 
GGCATCCTGC TCCTGCTCTG GCCGACGCTG TGGGCGCAAT GGCTCGCGAG CAACGGCGAC
CCGGACTGGC TGATCCTGTG GATTTTCGTC ATGGGCGTCG TGCTGATGCG GTCCGCGGGC
TGCGTCGTCA ACGATTACGC GGATCGGGAT TTCGACCCGC ACGTCGCGCG CACGCGCGAC
CGCCCGATCG CTGCTGGCAA GGTGTCACCG AAGGAAGCGC TGCTGCTCGC CGCCGGCCTG
TCGCTGCTCG CGTTTCTGCT GATCCTGCCC TTGAATGCGC TGGTGCTGAA GCTTTCGCTC
ATCGCGCTGT TTCTTGCCGG GAGCTATCCC TTCACGAAAC GCTTCTTTGC GATCCCCCAG
GCCTATCTCG GCGTCGCGTT CGGCTTCGGC ATCCCGATGA GCTACGCGGC GCTGTGGGGC
GAGGTGCCGG CCGAGGCCTG GCTCCTGCTG GCGGCAAACG TGTTCTGGGC GATCGCGTAC
GACACCGAGT ACGCGATGGT CGACCGTGCG GACGATCTCA AGATCGGCAT CAAGACCTCC
GCGATCACGT TCGGCCGCTT CGATCTCACG GCGATCGCCT TCTGTTATGC CGCGACGCTC
GCACTGCTCG CCTGGGTCGG TGCGCTGCGC GACTTCAGCG GCTGGTATTA CGCGGGGCTG
GCGGCGGCCG GAGCGATCGC CGTCTATCAC CTGCGGCTGA TCCGGGAGCG CGATCCCCGC
CAATGCTTCC GCGCGTTCCT GCACAACACC TGGTTCGGCG CCGCGGTCTT CGGCGGCATC
GTTCTTCACT TCCTGCTGCG CTCCGGCTCC CTTTTTCCGT AG
 
Protein sequence
MTLTERLSLY EKLARLDKPI GILLLLWPTL WAQWLASNGD PDWLILWIFV MGVVLMRSAG 
CVVNDYADRD FDPHVARTRD RPIAAGKVSP KEALLLAAGL SLLAFLLILP LNALVLKLSL
IALFLAGSYP FTKRFFAIPQ AYLGVAFGFG IPMSYAALWG EVPAEAWLLL AANVFWAIAY
DTEYAMVDRA DDLKIGIKTS AITFGRFDLT AIAFCYAATL ALLAWVGALR DFSGWYYAGL
AAAGAIAVYH LRLIRERDPR QCFRAFLHNT WFGAAVFGGI VLHFLLRSGS LFP