Gene Tbd_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0454 
SymbolrpsI 
ID3673082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp471876 
End bp472268 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID637709120 
Product30S ribosomal protein S9 
Protein accessionYP_314212 
Protein GI74316472 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0255963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.796217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTA ACTACAACTA TGGTACGGGT CGTCGCAAAT CGTCGGTCGC CCGCGTGTTC 
ATCAAGGCCG GCAGCGGCAA GATCGTCGTC AACGACAAGC CCGTCGACGA GTATTTTTCG
CGCGAGACCG GTCGCATGAT CGTGCGTCAG CCCCTCGTCC TGACCGACAA CCTCAATCGC
TTCGACATCA TGGTCAACGT CGCCGGTGGC GGCGAATCCG GCCAGGCCGG TGCGGTTCGC
CATGGCATCA CCCGTGCGCT GATCGATCTC GACGCCGGAA TGAAGCCGAC GCTGAAGGCA
GCCGGCCTCG TCACCCGCGA CGCCCGCGAA GTCGAGCGGA AGAAGGTCGG CTTCCACAAG
GCCCGTCGCC GCAAGCAGTT CTCGAAGCGC TGA
 
Protein sequence
MIGNYNYGTG RRKSSVARVF IKAGSGKIVV NDKPVDEYFS RETGRMIVRQ PLVLTDNLNR 
FDIMVNVAGG GESGQAGAVR HGITRALIDL DAGMKPTLKA AGLVTRDARE VERKKVGFHK
ARRRKQFSKR