| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0453 |
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| Symbol | rplM |
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| ID | 3673081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 471433 |
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| End bp | 471879 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637709119 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_314211 |
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| Protein GI | 74316471 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0286772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.569665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCT TTTCCGCTAA ATCGCATGAA GTCAAACGCG ACTGGTTCGT GGTTGACGCT
GATAACAAAG TGCTGGGCCG CCTCGCGTCC GAGATCGCGC GCCGTCTGCG TGGCAAGCAC
AAGCCGGAGT TCACCCCGCA CGTCGACACC GGCGATTACA TCGTTGTCGT CAATGCGAGC
AAGATGGTCG TGACCGGCAA CAAGGGCCTC GACAAGAAAT ACTATCGCCA CTCGGGCTAT
CCCGGCGGTA TCTACGAGAC CAACTTCGAC AAGATGCAGG CGCGCTTTCC GGGCCGTGCA
CTGGAAAAGG CGGTCAAGGG CATGCTCCCC AAGGGCCCGC TCGGCTATGC CATGATCAAG
AAAATGAAAA TCTACGCGGG CGCGGACCAT CCGCACGAGG CGCAACAGCC CAAGCCCCTC
GACATCAATG TTAAGGCTGC ATCATGA
|
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| Protein sequence | MKTFSAKSHE VKRDWFVVDA DNKVLGRLAS EIARRLRGKH KPEFTPHVDT GDYIVVVNAS
KMVVTGNKGL DKKYYRHSGY PGGIYETNFD KMQARFPGRA LEKAVKGMLP KGPLGYAMIK
KMKIYAGADH PHEAQQPKPL DINVKAAS
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