Gene Tbd_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0452 
Symbol 
ID3673080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp470561 
End bp471316 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID637709118 
Producttransmembrane protein 
Protein accessionYP_314210 
Protein GI74316470 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0249922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.582839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT GGCTCGCCAC CGACCTGATC GCCATTGCGC TGTTGCCGCC GCTTTCGCTC 
GTGATCGTGC TCGGCGCCGG CATCGCCATT CGCCGCCGTA ACCCCCGTCT TGCCATGTCG
CTGATCCTTG TATCGACCGC CGCGCTCTAC GCCCTGTCCA CCCCCTGGGT CGGCGGGCTG
CTGCTCAAGA GCCTCGAGAT CAGCGTGCCG GTGGACCCTG CACGATTGCA GGCCGACGCA
ATCGTCGTTT TGAGCGGCGG CCGACGCATG GCGTCGCGCG AATACGGCGG CGACACGCTC
AACGGCATCA GCCTCGAACG CCTGCGCTAC GCAGTTCGGC TACACCGCGC GACCGGCCTG
CCGCTGCTCG TCACCGGCGG CAACCCCGGC GGCGGAACGC TCGCCGAAGG CCAGATCCTC
GCCCAAGTCT TGCGCGACGA CTACGGGATC GAACCCCGCT GGGTCGAGGA CGCCGCGCTC
ACGACCTGGG ACAACGCGCG CTTGTCCGCG CCGCTGCTCA AAAAGAGTGG CGTCCATCGC
ATTGCGCTCG TCACCCACGC CTGGCACCTG CGCCGTGCGG TGCCGCTGTT CGAGGCGCAA
GAACTCGAAG TCATCCCCGC CGGCATCCAG TTCGCCAGCA CCGACCTCGA CCGCATTCTC
GATCTGCTGC CGACGCCGGC GGGTCTGCGC GACAGCAGCT TCGCCTTGCA CGAATGGCTG
GGCATTCTGT GGTACAAACT CCGCTCGAAT TTCTAG
 
Protein sequence
MTAWLATDLI AIALLPPLSL VIVLGAGIAI RRRNPRLAMS LILVSTAALY ALSTPWVGGL 
LLKSLEISVP VDPARLQADA IVVLSGGRRM ASREYGGDTL NGISLERLRY AVRLHRATGL
PLLVTGGNPG GGTLAEGQIL AQVLRDDYGI EPRWVEDAAL TTWDNARLSA PLLKKSGVHR
IALVTHAWHL RRAVPLFEAQ ELEVIPAGIQ FASTDLDRIL DLLPTPAGLR DSSFALHEWL
GILWYKLRSN F