Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0447 |
Symbol | |
ID | 3673075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 467137 |
End bp | 467985 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709113 |
Product | putative neutral zinc metallopeptidase |
Protein accession | YP_314205 |
Protein GI | 74316465 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00964466 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.614722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGG AACGCGGACG ACGCAGCAGC AACATCGAAG ATCGGCGCGG CATGCGGATC GGCGGCCGCG GGCTGGCCGG CGGCGGGATC GGCGCGATCG TGCTCGCGCT CGTCGCGATG TATTTCGGCG TCGACCCGTC GGTGGTGCTC AACCAGGTGG GCGGGCCGGC GGCGACCGAG CAGCAGGTCG CGCAGTCGCC CGAGGAGGAG CGACTCAAGG AATTCATGTC CGTCGTGCTC GCCGACACGG AGGATGTGTG GGGCACGTTG TTCCAGCAGT CGGGCCAGCC ATATCGGCAA CCGACGCTGG TGCTGTTTTC GGGTGCGGTG CAGTCGGCGT GCGGGTTTGC CGAAGCGGCG ATGGGGCCTT TTTACTGCCC GGGCGACCAG AAGCTCTATC TCGACATGAG CTTCTTCGAC GATCTCGCGC AGCGCCACGA CGCACCGGGC GATTTCGCCC AGGCCTACGT CGTCGCCCAC GAGGTCGGCC ACCACGTGCA GACGCTGCTC GGCGTCTCGC AGCAGGTACA CGCCGCGCGT CAGCGCTCCG GCGAGGCCGC GGGCAACGCG ATGCAGGTGC GCATGGAATT GCAGGCCGAC TGTTTCGCCG GCGTCTGGGC GCATCACGCC GACAAGACGC GTCAGGTGCT CGAACCGGGT GATGCGGAAG AGGCGCTGGC CGCTGCGGCC GGGGTCGGCG ACGACCGCCT GCAACGGCAG ACGCGTGGCA CGGTCGTGCC CGAATCCTTC ACGCACGGCG CGTCGGAACA GCGCATGCGC TGGTTCGCGC GCGGCATGCA GACAGGCGAC CCGGGGCAAT GCGATACATT CGAGGCGGCG AAGCTCTGA
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Protein sequence | MRWERGRRSS NIEDRRGMRI GGRGLAGGGI GAIVLALVAM YFGVDPSVVL NQVGGPAATE QQVAQSPEEE RLKEFMSVVL ADTEDVWGTL FQQSGQPYRQ PTLVLFSGAV QSACGFAEAA MGPFYCPGDQ KLYLDMSFFD DLAQRHDAPG DFAQAYVVAH EVGHHVQTLL GVSQQVHAAR QRSGEAAGNA MQVRMELQAD CFAGVWAHHA DKTRQVLEPG DAEEALAAAA GVGDDRLQRQ TRGTVVPESF THGASEQRMR WFARGMQTGD PGQCDTFEAA KL
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