| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0446 |
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| Symbol | |
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| ID | 3673074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 465871 |
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| End bp | 467061 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709112 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_314204 |
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| Protein GI | 74316464 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.208356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.425074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC GCGGTCCCTG GTCGCGGCTG TTTTTTCGCC GCGTCGACAT GGTTTCGGGC
AACCACCTGC GGCTGTTGCA GAGCGGGGCC GACTACTTCC CTGCGCTGAT CGCCGCGTTC
GACGCCGCCC GCGCCGAAAT CTATCTTGAA ACCTATATCT TCAACGCCGA CTCGACGGCC
GAGGCCGTGC GCGACGCGCT CGTTCGCGCC GCGCAGCGCG GCGTGCAGGT GCGCGTCCTG
ATCGACGCGA TCGGTTCGCG TGAACTGCCT GCCGCGTGGC TGGAAGCACT GAAGACGGCG
GGCGTCGCCG TCCTCAAGTA CCGGCCGCTG GTCACCGGCT GGCGCTCGAA TCCGAAAAGT
CTGCGCCGAT TGCACCGCAA GGTCGCGGTC GTCGACGCGC GCATCGCTTT TGTCGGCGGC
ATGAATCTGC TCGACGATTT CGAGCCGATT CGCTTTCCTG TCGCGCGTTT CGACTTCAGC
GTCGAAGTGC AGGGGCCGCT GATCGTGGCG ATCCATCAAA GTGTGCACCA CCTGTGGCGT
CTGGTCGCCT TGAGCCAACT GCAGCCAATC GACCGCAAGC ATTCGGTTCA CCCTTCCTGG
CCGACCGACG GCCGCGTCCG CGCGGCTTTC GTGACGCGCG ACAGCTTTGC CCATCGGCGT
GACATCGAGC GCAGCTACCT GACGGCGCTT GCGCTCGCGC GCAGCGACAT CCTGATTGCG
AACGCCTATT TTCTGCCCGG CAACCGCTTC CGCAAGCTGC TGAAAAAAGC CGCGGCGCGT
GGGGTGCGCG TGCAGCTGCT CGTGCAGGGG CATACCGACC ATCCTTTTTT TCAGGCGGCG
TCGCGCGCGC TCTACCAGGA TCTTCTAGTC GCCGGCGTCA GCATCCGCGA GTATCAGGCG
AGCGAGTTGC ACGCCAAGGT CGCGGTCGTC GATGACCACT GGGCGACGGT CGGGTCGAGC
AACATCGACC CGTTCAGTCT GATGCTCGCG CGCGAGGCGA ACATCGTCGT CGACGACGTG
GGGTTCGCCG CCGACCTGCG CGAGCGCCTG CAGCGCGCGG TGGACGAATC GGCCGCGCTC
AGTGCCGCCG ACTGGAAGAT CCGTCCCTGG CGCCAGCGCC TGGCCTCGCG GCTTGCCTAC
GGGCTCGTGC GCTTTCTGCT TGGCGTCGCG CGGCTCGGGC GCTGGCTGTA A
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| Protein sequence | MTPRGPWSRL FFRRVDMVSG NHLRLLQSGA DYFPALIAAF DAARAEIYLE TYIFNADSTA
EAVRDALVRA AQRGVQVRVL IDAIGSRELP AAWLEALKTA GVAVLKYRPL VTGWRSNPKS
LRRLHRKVAV VDARIAFVGG MNLLDDFEPI RFPVARFDFS VEVQGPLIVA IHQSVHHLWR
LVALSQLQPI DRKHSVHPSW PTDGRVRAAF VTRDSFAHRR DIERSYLTAL ALARSDILIA
NAYFLPGNRF RKLLKKAAAR GVRVQLLVQG HTDHPFFQAA SRALYQDLLV AGVSIREYQA
SELHAKVAVV DDHWATVGSS NIDPFSLMLA REANIVVDDV GFAADLRERL QRAVDESAAL
SAADWKIRPW RQRLASRLAY GLVRFLLGVA RLGRWL
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