Gene Tbd_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0440 
Symbol 
ID3671707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp461632 
End bp461892 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content63% 
IMG OID637709106 
Producthypothetical protein 
Protein accessionYP_314198 
Protein GI74316458 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.518394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCT ATGCCTACAA ATGCAGTGCC TGCGGCTTCG CCCAGGATGA AATGCTAAAA 
GTGTCCGACG CGCCGTTGAC CGTGTGTCCA TCGTGCGGCA AGGACGCCTA CGCCAAGCAG
CTCACCGCGG CAGGGTTCGC GCTCAAGGGA ACCGGCTGGT ACGCCACCGA TTTCAAGGGC
GGTTCGAGCA AGCCCGCGGA GACCAAGACC GACGCGCCTT CGCACGCCTG CGGCACCGGT
GCGTGTCCGG CATGTAACTG A
 
Protein sequence
MPIYAYKCSA CGFAQDEMLK VSDAPLTVCP SCGKDAYAKQ LTAAGFALKG TGWYATDFKG 
GSSKPAETKT DAPSHACGTG ACPACN