| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0436 |
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| Symbol | |
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| ID | 3671703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 454617 |
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| End bp | 457439 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709102 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_314194 |
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| Protein GI | 74316454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.64292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.354082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCA TCCGCATCCG CGGCGCACGC ACGCACAATC TCAAGAACGT CAACCTCGAC
CTACCGCGCG ACAAGCTGGT CGTGATCACG GGTCTGTCGG GGTCGGGCAA ATCCTCGCTC
GCCTTCGACA CGCTCTACGC CGAAGGGCAA CGGCGCTACG TCGAATCGCT GTCGGCGTAC
GCGCGGCAGT TCCTGCAATT GATGGAAAAG CCCGACGTCG ACCTGATCGA GGGTCTGAGT
CCGGCGATTT CGATTGAGCA GAAGGCGACG AGCCACAACC CGCGCTCCAC GGTCGGCACG
GTCACCGAAA TCCACGACTA CCTGCGGCTG CTCTATGCGC GCGTCGGCGA TCCGCAATGT
CCCGAGCACG GCATCACGCT CGCCGCGCAG ACCGTCTCGC AGATGGTCGA CGCGGTGCTC
GCGCTGCCCG AGGACACGAA GCTCATGATC CTCGCGCCGC TCGTCGTCGG CCGCAAAGGC
GAGAACCTGG AACTCTTCGC CGAGCTTCGC GCGCAGGGCT TCGTGCGCGT GCGCGTCGAC
GGCAAGGTGC ACGAGATCGA CGCGGTCCCC AAGCTCGACA AGAACAAGAA ACACACGATC
GAGGTCGTCG TCGACCGCCT CAAGGTCAGG CCCGACGCCA AGCAGCGTCT CGCCGAGAGT
TTCGAGACCG CGCTGCGCCA TGCCGACGGC CGCGCGCTCG CGGTCGAGAT GGACAGCGGC
GAGGAGCATC TCTTCTCCGC GAAGTTCGCG TGTCCGGTCT GCAGCTACGC GCTGCCCGAA
CTCGAACCGC GCCTGTTTTC GTTCAACAAT CCGATGGGCG CGTGCGAGAC CTGCGACGGC
CTCGGCTCGA TCACCTTCTT CGACCCGGCG CGGGTCGTTG CCTTTCCGCA TCTTTCGCTC
GCGAGCGGCG CGATCAAGGG CTGGGACAAA CGCAACCAAT TCTTCTACAT GATGCTGCAG
AGCCTCGCGC TGCATTACGG CTTCGACCTC GACACGCCGT GGGACGCGTT GCCGGCGCGC
ATCCGCGAGG TGATCCTGAA CGGCAGCGGC AAGGAAGCGA TCGCGTTCCA GACGCTCGCG
CCGCGCGGCG GCTTCACGAC CAAGCGCTAC CCGTTCGAAG GCGTGCTCGC CAACATGGAG
CGGCGCTACC ACGAGTCGGA CTCGATGGCG GTGCGCGAGG AACTCGCCAA ATACCAGAAC
AACAAGCCCT GCCCCGCCTG CGACGGCACG CGCCTGCGCG AAGAGGCGCG CCACGTGATG
GTCGGCGGCG CGCCCATCTA CCGGGTCAGC GCCCTGCCGC TGAAACAGGT GCAGGCCTTC
TTCGCAGGGC TCGAGCTCGA CGGCCAGCGG GCGCAGATCG CCGACAAGAT CGTCAAGGAA
ATCATCGCCC GCGTCGGCTT CCTCAACAAC GTCGGCCTCG ACTACCTCTC GCTCGACCGC
TCGGCCGACA CCCTCTCGGG CGGCGAGGCG CAGCGCATTC GTCTGGCCTC GCAGATCGGC
TCGGGCCTCA CGGGCGTCAT GTACGTGCTC GACGAGCCGT CGATCGGCCT GCACCAGCGC
GACAACGATC GCCTGCTGGC GACGCTCAAG CACCTGCGCG ACATCGGCAA CTCGGTGCTG
GTCGTCGAGC ACGACGAGGA TGCGATCCGC GCGGCGGACT ACGTCGTCGA CATGGGTCCG
GGCGCGGGTG TCCATGGCGG CGAAGTCGTC GCCGAGGGCA GTCCCGAGGA AATCCGGCTC
AGCGCCGATT CGCTGACCGG CCAGTACCTG TCGGGACGGC TGCGCATCGA CATCCCGAAG
AAGCGGCGGC GGGCCGATCC CGAACGGCAG CTCGTCGTCA CGAATGCCCG CGGCAACAAT
CTCAAGAATG TCACGATGCG CCTCCCCGTC GGGCTCTTCG TGTGCATCAC GGGCGTGTCG
GGTTCGGGCA AATCGACGCT CATCAACGAC ACGCTCTACG CCGCGGTCGC GCGCCATCTC
TATGGCTCGA GCACGGAGCC CGCGCCACAC GACGAGATCC AGGGCCTCGA GTACTTCGAC
AAGGTGATCA ACGTCGACCA GTCGCCGATC GGCCGCACGC CGCGCTCGAA CCCGGCGACC
TATACCGGGC TCTTCACGCC GATCCGCGAA CTCTTCGCCG GCGTGCCCGA GGCGCGCGCA
CGCGGCTACG GCCCCGGCCG CTTCAGCTTC AACGTCAAGG GCGGGCGCTG TGAGGCCTGC
CAGGGCGACG GCGTGATCAA GGTCGAGATG CATTTCCTGC CGGACATCTA CGTGCCCTGC
GACGTCTGCC ACGGCGCGCG CTATAACCGC GAGACGCTCG AAGTGCAGTA CAAGGGCAAG
ACGATCCGCG ACATTCTCGA GATGACGATC GAGCAGGCGC ACGAATTCTT CGCGGCAGTA
CCCGTCGTCA GCCGCAAGCT GCAGACGCTG CTCGACGTCG GGCTCGGCTA CATCCGGCTC
GGCCAGTCGG CGACGACGCT GTCGGGCGGC GAAGCGCAGC GGGTCAAGCT CGCGCTCGAG
CTTTCCAAGC GCGACACCGG CCGCACGCTG TATATCCTCG ACGAGCCGAC GACCGGGCTG
CACTTCGCCG ACATCGATCT GCTGTTGAAG GTCTTGCAGC GTCTTTCCGA AGCGGGCAAT
AGCGTGGTCG TCATCGAACA CAACCTCGAC GTCATCAAGA CCGCCGACTG GCTGATCGAC
CTCGGCCCCG AAGGCGGCGC GGGCGGCGGC CTCATCATCG CCGAGGGCCC GCCCGAAGCC
GTCGCGGACA ACCCGGCGAG CCACACCGGG CAGTATCTTC AACCGGTGCT GTCGAGGCGC
TGA
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| Protein sequence | MEFIRIRGAR THNLKNVNLD LPRDKLVVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LYARVGDPQC
PEHGITLAAQ TVSQMVDAVL ALPEDTKLMI LAPLVVGRKG ENLELFAELR AQGFVRVRVD
GKVHEIDAVP KLDKNKKHTI EVVVDRLKVR PDAKQRLAES FETALRHADG RALAVEMDSG
EEHLFSAKFA CPVCSYALPE LEPRLFSFNN PMGACETCDG LGSITFFDPA RVVAFPHLSL
ASGAIKGWDK RNQFFYMMLQ SLALHYGFDL DTPWDALPAR IREVILNGSG KEAIAFQTLA
PRGGFTTKRY PFEGVLANME RRYHESDSMA VREELAKYQN NKPCPACDGT RLREEARHVM
VGGAPIYRVS ALPLKQVQAF FAGLELDGQR AQIADKIVKE IIARVGFLNN VGLDYLSLDR
SADTLSGGEA QRIRLASQIG SGLTGVMYVL DEPSIGLHQR DNDRLLATLK HLRDIGNSVL
VVEHDEDAIR AADYVVDMGP GAGVHGGEVV AEGSPEEIRL SADSLTGQYL SGRLRIDIPK
KRRRADPERQ LVVTNARGNN LKNVTMRLPV GLFVCITGVS GSGKSTLIND TLYAAVARHL
YGSSTEPAPH DEIQGLEYFD KVINVDQSPI GRTPRSNPAT YTGLFTPIRE LFAGVPEARA
RGYGPGRFSF NVKGGRCEAC QGDGVIKVEM HFLPDIYVPC DVCHGARYNR ETLEVQYKGK
TIRDILEMTI EQAHEFFAAV PVVSRKLQTL LDVGLGYIRL GQSATTLSGG EAQRVKLALE
LSKRDTGRTL YILDEPTTGL HFADIDLLLK VLQRLSEAGN SVVVIEHNLD VIKTADWLID
LGPEGGAGGG LIIAEGPPEA VADNPASHTG QYLQPVLSRR
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