Gene Tbd_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0428 
Symbol 
ID3671695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp448638 
End bp449030 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID637709094 
Product30S ribosomal protein S11 
Protein accessionYP_314186 
Protein GI74316446 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.316417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.141179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTA AAACAGCAGC GCGTGTCCGC AAGAAGGTCA AAAAGAACGT CGCAGAAGGT 
ATTGCGCACA TCCATGCCTC GTTCAACAAC ACCATCGTGA CGATCACCGA TCGCCAGGGC
AACGCCCTGT CGTGGGCGAC GGCAGGCGGC GCGGGCTTCA AGGGCTCCCG CAAGTCGACG
CCGTTCGCGG CCCAGGTCGC CGCGGAAAAC GCCGGCAAGA TGGCGCAGGA ATACGGCGTC
AAGAACCTGG AAGTGCGGAT CAAGGGCCCC GGCCCTGGCC GCGAGTCGAC GGTGCGCGCG
CTGAATGCGC TCGGCTTCAA GATCGTTGCG ATCTCCGATG TCACGCCGAT CCCGCACAAC
GGTTGCCGTC CCTCCAAAAA GCGTCGTATC TAA
 
Protein sequence
MATKTAARVR KKVKKNVAEG IAHIHASFNN TIVTITDRQG NALSWATAGG AGFKGSRKST 
PFAAQVAAEN AGKMAQEYGV KNLEVRIKGP GPGRESTVRA LNALGFKIVA ISDVTPIPHN
GCRPSKKRRI