| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0425 |
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| Symbol | secY |
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| ID | 3671692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 446492 |
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| End bp | 447805 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709091 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_314183 |
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| Protein GI | 74316443 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.65116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.157207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACGC CCAAGACAGG CCTGAACAAA TTCGGCGATC TCAAACGTCG CCTGCTGTTC
CTGCTCGGCG CACTGATCGT CTACCGTATC GGGACCTTCA TCCCGGTTCC GGGTATCGAT
CCCCTCGTGC TCGACCAGCT GTTCAAGTCG CAGCAAGGCG GCATCCTGGG CATGTTCAAC
ATGTTCTCGG GTGGCGCGCT TTCCCGTTTC AGCGTCTTCG CGCTCGGGAT CATGCCGTAT
ATCTCGGCGT CGATCATCGT GCAGCTCATG ACGACGGTCT CGCCGCAGTT GGAGGCCTTG
AAGAAGGAAG GCGAGGCCGG GCGGCGCAAG ATCACGCAGT ACACGCGCTA CGGGACGCTG
TTCCTTGCGG TATTCCAGGC GCTGGGGATT GCGATCGCGC TGGAAGCGCA GGCTGGGCTC
GTGCTCGACC CGGGAATGGC CTTCCGTCTG ATCACGGTCG TGACGCTGAC CGCCGGCACG
ATGTTCCTGA TGTGGCTCGG CGAGCAGATC ACCGAACGCG GCCTCGGCAA CGGCATTTCG
ATCATCATCT TCGCCGGTAT CGCTGCCGGG CTTCCGTCCG CGATCGGCGG CACGCTCGAG
CTGACTCGCA CCGGCGCGTT CTCGATTCCG CTGGTGCTGA TGCTGTTCGT CGGCGTGCTG
CTCGTTACCG CCCTCGTGGT GTTCGTCGAA CGCGGGCAGC GCAAAATCCT GGTCAACTAT
GCCAAGCGGC AGGTCGGCAA GATGGTCGTG GGCGGGCAGA GCTCGCACCT GCCGCTGAAG
CTGAACATGG CCGGCGTGAT TCCGCCGATC TTCGCGTCGA GCATCATCCT GTTCCCCGCG
ACCCTGGCCG GGTGGTTCGG CAGCGGCGAG AACATGGGAT GGCTGAAGGA TGTCGGGGCG
ACGTTGTCGC CCGGGCAGCC CGTATACGTG CTGTTGTACG CGCTCGCGAT CATCTTCTTC
TGCTTTTTCT ATACGGCGCT CGTGTTCAAT CCCAAGGAAA CGGCGGACAA CCTCAAGAAG
AGCGGCGCGT TCGTGCCGGG AATCCGGCCC GGTGACCAGA CCGCGCGCTA CATCGACAAG
ATTCTGACGC GGCTGACCTT GGTCGGTGCG ATTTACATCA CGCTCGTCTG CCTGCTGCCC
GAGTTTCTGA TCCTGAAATG GAACGTCCCC TTCTATTTCG GCGGCACGTC CCTGCTGATC
ATCGTGGTGG TGACGATGGA CTTCATGGCG CAGGTCCAGG CCTACGTGAT GTCGCACCAG
TACGAAGGAC TGCTCAAGAA GGCGAATTTC AAGAACGGTC TGGTGGGGCG GTGA
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| Protein sequence | MATPKTGLNK FGDLKRRLLF LLGALIVYRI GTFIPVPGID PLVLDQLFKS QQGGILGMFN
MFSGGALSRF SVFALGIMPY ISASIIVQLM TTVSPQLEAL KKEGEAGRRK ITQYTRYGTL
FLAVFQALGI AIALEAQAGL VLDPGMAFRL ITVVTLTAGT MFLMWLGEQI TERGLGNGIS
IIIFAGIAAG LPSAIGGTLE LTRTGAFSIP LVLMLFVGVL LVTALVVFVE RGQRKILVNY
AKRQVGKMVV GGQSSHLPLK LNMAGVIPPI FASSIILFPA TLAGWFGSGE NMGWLKDVGA
TLSPGQPVYV LLYALAIIFF CFFYTALVFN PKETADNLKK SGAFVPGIRP GDQTARYIDK
ILTRLTLVGA IYITLVCLLP EFLILKWNVP FYFGGTSLLI IVVVTMDFMA QVQAYVMSHQ
YEGLLKKANF KNGLVGR
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