Gene Tbd_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0424 
Symbol 
ID3671691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp446039 
End bp446473 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID637709090 
Product50S ribosomal protein L15P 
Protein accessionYP_314182 
Protein GI74316442 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.41995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.220664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA ACAACATTAA ACCGGCCGAC GGTGCCAAGA AAGACAAGCG TCGCGTCGGA 
CGCGGCATCG GCTCGGGCCT CGGCAAGACC GCGGGTCGCG GTCACAAGGG TCAGAAGTCC
CGTGCCGGTG GCTTCCACAA GGTCGGCTTC GAAGGCGGTC AGATGCCGAT GCATCGCCGG
CTGCCCAAGC GCGGCTTCGT CTCCCTGACC AAGGGGGATA CGGCGCGCGT TCGTTTGTCG
GATCTGGCCG GCGTCGGCGT CGCCGAAATC GATTTGCTGG TATTGAAGCA GGCGGGTGTC
GTGAGCGGCG CTGCGAAAGC TGCGAAGGTC TATCTCGCGG GTGAGCTCGG CAAGGCGATC
AAGCTGAGCG GTGTCGCGGT GACCAAGGGT GCGCGTGCGG CCATCGAAGC GGCCGGCGGC
AGCGTCGCCG AGTAA
 
Protein sequence
MELNNIKPAD GAKKDKRRVG RGIGSGLGKT AGRGHKGQKS RAGGFHKVGF EGGQMPMHRR 
LPKRGFVSLT KGDTARVRLS DLAGVGVAEI DLLVLKQAGV VSGAAKAAKV YLAGELGKAI
KLSGVAVTKG ARAAIEAAGG SVAE