Gene Tbd_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0414 
SymbolrpsQ 
ID3671681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp441994 
End bp442257 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content61% 
IMG OID637709080 
Product30S ribosomal protein S17 
Protein accessionYP_314172 
Protein GI74316432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000036421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.356143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA TCAAGAAGGT GGTGCGCACG CTCACCGGGC GTGTCGTGAG CGACAAGATG 
AACAAGACGG TGACGGTGCT GGTCGAGCGT CGCGTCAAGC ACCCGGTGAT CGGCAAGGTG
ATCCGGATGT CGAAGAAGTA CCACGCGCAC GACGAAAACA ACGAGTGCCA CGAGGGCGAT
ACGGTGCAGA TCGAGGAGTC GCGCAAGCTG TCGCGCACCA AGGCCTGGAC CGTCAGCAAG
CTGGTCGAGC GCGCGCGCGT ATAA
 
Protein sequence
MSEIKKVVRT LTGRVVSDKM NKTVTVLVER RVKHPVIGKV IRMSKKYHAH DENNECHEGD 
TVQIEESRKL SRTKAWTVSK LVERARV