Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0414 |
Symbol | rpsQ |
ID | 3671681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 441994 |
End bp | 442257 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637709080 |
Product | 30S ribosomal protein S17 |
Protein accession | YP_314172 |
Protein GI | 74316432 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000036421 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.356143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA TCAAGAAGGT GGTGCGCACG CTCACCGGGC GTGTCGTGAG CGACAAGATG AACAAGACGG TGACGGTGCT GGTCGAGCGT CGCGTCAAGC ACCCGGTGAT CGGCAAGGTG ATCCGGATGT CGAAGAAGTA CCACGCGCAC GACGAAAACA ACGAGTGCCA CGAGGGCGAT ACGGTGCAGA TCGAGGAGTC GCGCAAGCTG TCGCGCACCA AGGCCTGGAC CGTCAGCAAG CTGGTCGAGC GCGCGCGCGT ATAA
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Protein sequence | MSEIKKVVRT LTGRVVSDKM NKTVTVLVER RVKHPVIGKV IRMSKKYHAH DENNECHEGD TVQIEESRKL SRTKAWTVSK LVERARV
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