Gene Tbd_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0410 
Symbol 
ID3671677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp440354 
End bp440683 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID637709076 
Product50S ribosomal protein L22P 
Protein accessionYP_314168 
Protein GI74316428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000110454 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.134806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTT CTGCGATTTT GCGTGGTACC CGCCTGTCCG CACAGAAAGG CCGTCTGGTC 
GCCGACCAGA TCCGTGGCCT GCGCGTGGAG AAGGCGCTGA ATATTCTGGC GTTCAGCCCC
AAGAAGGGCG CCGGCATCAT CAAGAAGGTG CTCGAGTCGG CGATCGCCAA CGCCGAGCAC
AATGAAGGTG CCGACATCGA CGCCCTGAAG GTCAAGACGA TTTATGTCGA CCAGGGCTCC
GTGCTGAAGC GCTTCACCGC CCGCGCCAAA GGCCGTGGCA ACCGTATTAG CAAACCGACC
TGTCACATCA CCGTGACGGT CGGCGATTAA
 
Protein sequence
MEVSAILRGT RLSAQKGRLV ADQIRGLRVE KALNILAFSP KKGAGIIKKV LESAIANAEH 
NEGADIDALK VKTIYVDQGS VLKRFTARAK GRGNRISKPT CHITVTVGD