Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0408 |
Symbol | rplB |
ID | 3671675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 439225 |
End bp | 440052 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637709074 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_314166 |
Protein GI | 74316426 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000019918 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.14889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA TTAAAGTCAA ACCCACCTCT GCCGGTCGCC GCGCCGTCGT CAAGGTCGTC ACGCCCGGGC TGCACAAGGG CAAGCCGCTT GCCGCACTGC TCGAGCCGAA GAAGCGTGGC TCCGGCCGCA ACAACAACGG CCACATCACG GTCCGCCACA AGGGCGGCGG CCACAAGCAG CACTACCGCG TTGTCGATTT CCGTCGCAAC AAGGACGGCA TCCCGGCGAA GGTCGAGCGT ATCGAGTACG ATCCCAACCG CTCGGCACAC CTGGCGCTGC TGTGCTACGC CGACGGCGAG CGTCGCTACA TCATCGCGCC GCGGGGCATC GCGGTTGGCG CGCAGCTCGT GAACGGCGTC GAGGCCCCGA TCAAGGCGGG CAACTGCCTG CCGCTGCGCA GCATTCCGGT GGGTAGCACC GTGCACTGCG TCGAGATGAT GCCCGGCAAG GGAGCTCAGA TCGCGCGTTC GGCGGGTACC TCGGTCCAGC TGCTGGCGCG CGAGGGCAGC TACGCTCAGC TCCGTCTGCG TTCGGGCGAG ATCCGCAAGG TGCACGTCGA CTGCCGCGCG ACGCTCGGCG AGTGCGGCAA TGAAGAGCAC AGCCTGCGTT CGATCGGCAA GGCCGGCGCG AGTCGCTGGC GCGGTATCCG CCCGACCGTC CGTGGTGTCG TGATGAACCC GGTCGATCAC CCGCACGGCG GTGGCGAGGG GCGCACGGCT GCCGGTCGGC ATCCGGTCAG CCCGTGGGGT ACGCCGACCA AGGGCTACCG TACCCGCAGC AACAAGCGCA CCTCCAACAT GATCGTCCGC CGCCGTCACG CGCGCTGA
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Protein sequence | MALIKVKPTS AGRRAVVKVV TPGLHKGKPL AALLEPKKRG SGRNNNGHIT VRHKGGGHKQ HYRVVDFRRN KDGIPAKVER IEYDPNRSAH LALLCYADGE RRYIIAPRGI AVGAQLVNGV EAPIKAGNCL PLRSIPVGST VHCVEMMPGK GAQIARSAGT SVQLLAREGS YAQLRLRSGE IRKVHVDCRA TLGECGNEEH SLRSIGKAGA SRWRGIRPTV RGVVMNPVDH PHGGGEGRTA AGRHPVSPWG TPTKGYRTRS NKRTSNMIVR RRHAR
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