| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0395 |
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| Symbol | |
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| ID | 3671662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 422287 |
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| End bp | 422982 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709061 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_314153 |
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| Protein GI | 74316413 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.780238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00704539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAACG TATCCAAGCG CCTGCGCGCA CTCAAGGAAA AAATCGACCG CTCGCGCAAC
TACCCGGTCG TCGATGCGCT GCAACTGGTC AAGGACAGCG CCACGGCGAA GTTCGACGAG
TCGATCGACG TCGCAGTCAA CCTCGGCGTC GACGCGCGCA AATCCGACCA GATGGTGCGC
GGCGCCGTCG TGCTGCCCAA GGGCATCGGC AAGACCGTTC GCGTCGCCGT CTTCGCCCAG
GGCGACAACG CGCAGAAGGC GCGTGACGCC GGCGCCGACA TCGTCGGCTT CGACGACCTG
GCCGCCGACA TCAAGGCCGG CAAGATGGAT TTCGACGTCG TCATCGCGAC GCCCGATGCC
ATGCGCGTCG TCGGCCAGCT TGGCCAGATC CTCGGTCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CGGTCTCCCC CGACGTCGTC GGCGCGGTCA AGAACGCCAA GGCGGGCCAG
GTGCAGTACC GCACCGACAA GGGCGGCATC GTGCACTGCA CGATCGGCCG TGCCTCGTTC
AGCGTCGATG ATCTGAAGGA GAACCTGGTC GCGCTGCTCG ACGCGCTGCA GCGCGCCAAG
CCCGCGAGCT CCAAGGGCAT CTACTTCAAG CGCCTGTCGG TGTCGAGCAC GATGGGGGTT
GGCGTTCGCG TCGACCAGGG CAGCGTCGCT GCCTGA
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| Protein sequence | MANVSKRLRA LKEKIDRSRN YPVVDALQLV KDSATAKFDE SIDVAVNLGV DARKSDQMVR
GAVVLPKGIG KTVRVAVFAQ GDNAQKARDA GADIVGFDDL AADIKAGKMD FDVVIATPDA
MRVVGQLGQI LGPRGLMPNP KVGTVSPDVV GAVKNAKAGQ VQYRTDKGGI VHCTIGRASF
SVDDLKENLV ALLDALQRAK PASSKGIYFK RLSVSSTMGV GVRVDQGSVA A
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