| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0384 |
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| Symbol | |
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| ID | 3673736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 412204 |
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| End bp | 413982 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637709045 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_314142 |
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| Protein GI | 74316402 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.315529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0233306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCC TCAAGCTGCT CCCTCTCTAT GCCGCGCTGG CGCTCACGGC GGCGTGTGGC
CAGTTGGCCC CCAGGCCCGA CGCGCCGACG CTTGCGAAAG CGCAGGCCCC GGCGGCCGAA
GCGGATGCCG CGGACGAAGC CGAGGCGGCC CCCGACGCCG AAGCCGAGGC CCGTGCGAAA
GCCGAGGCCG CGCTGCCGCG CCAGCCGCTG ACGCCTGAAC TGCTGCTCAA ATTCCTCGTC
GCCGAGGTTG CCGGTCAGCG CGGGGCGATC GGAATCGCCC AGACGACGTA TCTCGATCTG
GCCCGCCAGA CCCGGGACCC GCGCGTCGCG CAGCGTGCGG CCGAAGTCTC GGCGTTCGCG
CGCGACCCCG CGGGCGCGCT CGAGGCGACG CGGCTCTGGG CCGAGGCGGA CAAGGATTCG
CTGCGCGCGC AGCAGACCTT GGCGGCTTTG TTGCTGAGCG AGGGCAGGCT CGCCGAGGCC
GAGCCTGTTC TGCGTGCGCT GTTGCAGGAA AAGCCGGCCG AGGGTTTTCT TCACCTCGCC
GCCGCGATCG GGAAAATGCG TGATTCGGCC GCTGCGCTCG AACTGGTCCG GCGCCTCGCG
GCAGACCATC CGCAACTGCC CGAGGCGCAA TTCGCGATCG CGCAGGCCGC GGCAAGTGCC
GGACAGTTCG ACACGGCGCT CGCCGCGCTG CAAAAGGCCG ACAGCCTGCG CCCGGGTTGG
GAGCCGGGCG CCCTGCTGCA CGCGCAGATC CTCGCGCGGA CCTCGAACGC CGCCGCGCTG
GCCTTCATGC GCACGTTTTT GGCCGAGCAC GGCGACGCGC GCGAGGTCCG GCTGGCTTAC
GCGCGGACGC TGGTCAGCGC GAACCAGTTC ACCGAAGCGC GCGCGGAGTT CGCCCGCCTG
ACGCGCGATT TCCCGCGCAA CGCCGAAGTC AGCCTCGCGG CAGGGCTCCT GTCGCTGCAG
TTGGGCGACC TCGACGCCGC GCACGCGCTT TTGACGCAGA CGCTCGAATA CAACCCGCGC
GATCCCGATA CGATCCACTA TTACCTCGGC CAGACCGCCG AGCAGATGAA GCGCGCCGAT
GCCGCGGCGA TGCACTACGA GCAGGTCCGG AGCGGCAACC ATTTCGTGCC GGCGCGTGCG
CGTCAGGCGG CGCTCCTCGC GCAGGCGGGC AAGCATGAGG AGGCGCGGGC GCTGCTCGCG
GCGACTCAAG GGCAGAACGA CGCGCAAAAC GTGCGCCTGA TTCAGGCGCA GGCCGAACTG
CTGCGCGAAA GCAAGGCGTA CGCCGCCATC TTCGACGTGC TGTCGGAGGG GCTCAAACGC
TATCCCGACG CGCCCGATCT CCTGTATGAC CGGGCGATGG CCGCCGAGAA GCTCGACAGG
CTCGACATCC TCGAGGCCGA CCTGCGCCGC GTCATCGTGC TGCGCCCCAA CGATGCCCAG
GCGTACAACG CGCTCGGCTA CACACTGGCC GATCGCACCG AACGGCTGGC CGAGGCGATC
GAACTGCTCG ACAAGGCGCT CGCACTCGCG CCGGAAGATC CTTTCATCCT CGACAGCGTG
GGCTGGGCGC AGTACCGCTC GGGCAACCTC GCGCGCGCGC AGCAGTATCT CGAGCGCGCC
TACAAGGTAC GTCCGGATCC CGAAATCGCT GCGCACCTGG GTGAGGTGCT GTGGGCGCAG
GGCCAGCGTG ACGAAGCCGG CAAGCTCTGG CAGGCGAGCC TGCAGACCCA TCCGGGCAAC
GAGGTGCTGC TCGAAACGCT GCGCCGCCTC AAGCGCTGA
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| Protein sequence | MTPLKLLPLY AALALTAACG QLAPRPDAPT LAKAQAPAAE ADAADEAEAA PDAEAEARAK
AEAALPRQPL TPELLLKFLV AEVAGQRGAI GIAQTTYLDL ARQTRDPRVA QRAAEVSAFA
RDPAGALEAT RLWAEADKDS LRAQQTLAAL LLSEGRLAEA EPVLRALLQE KPAEGFLHLA
AAIGKMRDSA AALELVRRLA ADHPQLPEAQ FAIAQAAASA GQFDTALAAL QKADSLRPGW
EPGALLHAQI LARTSNAAAL AFMRTFLAEH GDAREVRLAY ARTLVSANQF TEARAEFARL
TRDFPRNAEV SLAAGLLSLQ LGDLDAAHAL LTQTLEYNPR DPDTIHYYLG QTAEQMKRAD
AAAMHYEQVR SGNHFVPARA RQAALLAQAG KHEEARALLA ATQGQNDAQN VRLIQAQAEL
LRESKAYAAI FDVLSEGLKR YPDAPDLLYD RAMAAEKLDR LDILEADLRR VIVLRPNDAQ
AYNALGYTLA DRTERLAEAI ELLDKALALA PEDPFILDSV GWAQYRSGNL ARAQQYLERA
YKVRPDPEIA AHLGEVLWAQ GQRDEAGKLW QASLQTHPGN EVLLETLRRL KR
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