Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0383 |
Symbol | |
ID | 3672770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 411196 |
End bp | 412008 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709044 |
Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
Protein accession | YP_314141 |
Protein GI | 74316401 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.428685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0194534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAAC TACCCGAAGT CGAGACCACC CGCGCCGGCC TGTCGCCCCG TTTGCAGGGT CGCGTGCTGA CCCGCGTCAT CGTTCGCGAG CCGCGTCTGC GCTGGCCGAT CCCGCCCGAC CTCGACACGC AATTGCGGGG CCTCACGCTC CACGGCCTCG CCCGGCGCGG CAAATACCTG CTGTTCGACT TCGGCGCTGT CACCCAGCTC GTCCATCTCG GCATGTCGGG GAGCCTGCGC CTCACCGAGC CCGCGGAGCC CGCTGCGCGC CACGACCACG TCGACTGGCG CTTCGACGAC GGAACGATCC TGCGCCTGCG CGACCCGCGC CGCTTCGGCG CGGTGCTGCT GACCGAGAAC GCGCCCGGAC ATCCGCTCCT CGCCGGCCTC GGTCCGGAAC CCCTGAGCAC GGCGTTCGAC GCGGCCTATC TGCACACGCA GTGCCAGCGT CGCAAGACCG CGATCAAGCC GCTCATCATG GATGCCCATG TCGTCGTCGG CGTCGGTAAC ATCTACGCTT CGGAATCCTT GTTCCACGCC GGAATCCGCC CGGGCGTCGC CGCCCACCGC CTAAGCCGGG CGGCGTGCGC GCGGCTGGCC GACGCGATCA AACAGGTGTT GACTGCGGCC ATCGCAGCAG GCGGCAGTTC GCTGCGGGAC TACGTCCAAA GCAGCGGCGA ACTGGGGTAT TTCCAGTTGC AGACGCGGGT CTACGACCGC GAAGACGCGC CGTGCAGGCG GTGCGCAACG CCGATCCGCC GCATCGTCCA GGCGCAGCGT GCGAGCTTCT ACTGCCCGAC GTGCCAGCGC TGA
|
Protein sequence | MPELPEVETT RAGLSPRLQG RVLTRVIVRE PRLRWPIPPD LDTQLRGLTL HGLARRGKYL LFDFGAVTQL VHLGMSGSLR LTEPAEPAAR HDHVDWRFDD GTILRLRDPR RFGAVLLTEN APGHPLLAGL GPEPLSTAFD AAYLHTQCQR RKTAIKPLIM DAHVVVGVGN IYASESLFHA GIRPGVAAHR LSRAACARLA DAIKQVLTAA IAAGGSSLRD YVQSSGELGY FQLQTRVYDR EDAPCRRCAT PIRRIVQAQR ASFYCPTCQR
|
| |