| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0326 |
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| Symbol | |
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| ID | 3672112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 349238 |
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| End bp | 350818 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637708987 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_314084 |
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| Protein GI | 74316344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.283481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0134906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG CAGTCCACGC CCACGAAGAC CACGGACACC ACGCGCACCC GAGCGGGATC
ATGCGCTGGC TGACGACCAC CAACCACAAG GACATCGGGA CCCTCTATCT GTGGTTCTCG
CTGATCATGC TGTTCTCCGC CGGGAGCATG GCGCTCATGA TACGCGCCGA GCTGTTCCAG
CCGGGTCTGC AGCTTACGCA GCCGGATTTC TTCAATCAGC TCACGACGAT GCACGGGCTG
ATCATGATCT TCGGCGTGAT CATGCCGGCC TTCTCGGGCT TCGCGAACTG GCAGGTGCCG
CTGATGCTCG GCGCCCCGGA CATGGCCTTC CCGCGCATGA ACAACTGGGC GTTCTGGATC
CTGCCGGTCG CGGCGATCCT GCTCTTGAGT TCCTTCGTGC TGCCGGGCGG TGCAGTCGCG
GGTGGCTGGA CGATGTATCC GCCGCTCTAC ATCCAGGGCG GCATCTCCTA CGATCTCACG
ATCCTCGCCG TGCACATCAT GGGCCTGTCG TCGATCATGG GCTCGATCAA CATTATCACG
ACCATCCTCA ACATGCGTGC GCCGGGCCTC ACGCTGATGA AGATGCCGCT GTTCGTGTGG
ACCTGGCTGA TCACCGCCTA CCTGCTCATC GCGACCATGC CGGTGCTCGC GGGGGCGGTG
ACGATGCTGC TGACCGACCG CAATTTCGGT ACGCACTTCT TCAACGCGGC CGGTGGCGGC
GACCCGGTCA TGTTCCAGCA TATCTTCTGG TTCTTCGCGC ATCCCGAGGT CTACATCCTG
ATCCTGCCCG CATTCGGCAT CGTCTCGCAG GTGATTCCGA CCTTCTCGCG CAAGCCGCTG
TTCGGCTACG CCTCGATGGT GTACGCGACC GCCTCGATCG CGATCCTGTC GTTCATCGTC
TGGGCCCACC ACATGTTCAC GGTCGGCATG CCGGTCGCCG CGCAGTTGTT CTTCATGCTC
TCAACCATGC TGATCGCGGT GCCGACGGGA GTGAAGGTCT TCAACTGGAC CGCGACGATG
TGGAAGGGCT CGCTGACTTT CGAGACGCCG ATGCTGTTCG CGATCGCCTT CGTCTGCCTG
TTCACGATCG GTGGCTTCTC GGGCCTCGTG CTCGCGATTG CGCCGGTCGA CATCCAGTTG
CACGACACCT ATTACGTGGT CGCGCACTTC CACTACGTGC TCGTCTCCGG CGCGCTATTC
TCGATCTTCG CCGGCATCTA CTACTGGCTG CCGAAATGGA CCGGCCACAT GTACGACGAG
CGGCTCGGCA AATGGCACTT CTGGCTGTCG GTGATCGGCA TGAACATCGT GTTCTTCCCG
ATGCATTTCC TCGGGCTCGC TGGCATGCCG CGGCGCATTC CCGACTACTC GCTGCAGTTC
ACCGAGTTCA ACCAGATCGC GACGGTCGGT GCCTTCATGT TCGGATTCAG CCAGCTCATC
TTCCTGGTCG TGGTCCTCAA GGCGATCCGC GGCGGCGTGA AAGCCCCGGC CCAGGTGTGG
GAGGGCGCGG AAGGCCTCGA GTGGACGGTG CCGTCGCCGG CGCCGTATCA CACCTTCGTC
ACTGCGCCGG TGGTCAAATG A
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| Protein sequence | MSDAVHAHED HGHHAHPSGI MRWLTTTNHK DIGTLYLWFS LIMLFSAGSM ALMIRAELFQ
PGLQLTQPDF FNQLTTMHGL IMIFGVIMPA FSGFANWQVP LMLGAPDMAF PRMNNWAFWI
LPVAAILLLS SFVLPGGAVA GGWTMYPPLY IQGGISYDLT ILAVHIMGLS SIMGSINIIT
TILNMRAPGL TLMKMPLFVW TWLITAYLLI ATMPVLAGAV TMLLTDRNFG THFFNAAGGG
DPVMFQHIFW FFAHPEVYIL ILPAFGIVSQ VIPTFSRKPL FGYASMVYAT ASIAILSFIV
WAHHMFTVGM PVAAQLFFML STMLIAVPTG VKVFNWTATM WKGSLTFETP MLFAIAFVCL
FTIGGFSGLV LAIAPVDIQL HDTYYVVAHF HYVLVSGALF SIFAGIYYWL PKWTGHMYDE
RLGKWHFWLS VIGMNIVFFP MHFLGLAGMP RRIPDYSLQF TEFNQIATVG AFMFGFSQLI
FLVVVLKAIR GGVKAPAQVW EGAEGLEWTV PSPAPYHTFV TAPVVK
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