Gene Tbd_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0321 
Symbol 
ID3672107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp345067 
End bp345810 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID637708982 
ProductBioH 
Protein accessionYP_314079 
Protein GI74316339 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01738] putative pimeloyl-BioC--CoA transferase BioH 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.026043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGC CTAAGCCGGT TCTCGTGCTG GTGCATGGCT GGGGCATGAA CGCCCGCGTC 
TTCGATGCGC TCGCCGACCG CCTCGATGAC CGCTTCGACG TGCGCGGGTT CGACCTGCCG
GGCCATGGCG GACGCGACGC GCAAGCGGTC AACACGCTCG AGGCCTGGGC CGACGCGCTT
GCCGATGCAC TGCCCGACGA CGCCAACCTG CTCGGCTGGT CGCTCGGCGG CCAGGTCGCG
TTGCGCGCCG CGCTCGATCA CCCGAGGAAG GTCGCGCGCC TGATCCTCGT CGCAACGACG
CCGCGGTTCG TCCAGCGCGC GGACTGGGCG AGCGCGATGG ACGCCGCCGA TCTCGCCGCC
TTCGGGGAGG CGCTCCTCGC GGACCCGGCC ACAACGCTGC AGCGGTTCCT CAGTCTGCAG
ACCCGCGGCA CGCCGGGGCA GAAGGCGCTC CTGCAGCATT TGCGGCAGGC GCTCCGCGAG
GCGCCCGAGC CCGACCGGGT CGCACTGGCG GCGGGGCTCG CGATCCTCCG CGATACCGAC
TTGCGCGGCG ACGTGTTGCG GCTGACCCAT CCGACGCTGG TGCTGCACGG CGCGCTCGAC
ACGCTGACGC CCGCCGCCGC GGGGGCCTGG CTTGCGGCTA ATCTGCGCGC AGCGCGCCAC
GTCGAACTCG AGCGGGCTGC GCACGCGCCG CATCTGTCGC ATCCCGACGA TGTCGCGCGC
GAGATCGAAC GGTTTTGCCT ATGA
 
Protein sequence
MSSPKPVLVL VHGWGMNARV FDALADRLDD RFDVRGFDLP GHGGRDAQAV NTLEAWADAL 
ADALPDDANL LGWSLGGQVA LRAALDHPRK VARLILVATT PRFVQRADWA SAMDAADLAA
FGEALLADPA TTLQRFLSLQ TRGTPGQKAL LQHLRQALRE APEPDRVALA AGLAILRDTD
LRGDVLRLTH PTLVLHGALD TLTPAAAGAW LAANLRAARH VELERAAHAP HLSHPDDVAR
EIERFCL