Gene Tbd_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0317 
Symbol 
ID3672103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp341702 
End bp342394 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID637708978 
Producthypothetical protein 
Protein accessionYP_314075 
Protein GI74316335 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0134906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCC GCTCATTTCT CGATCACCTT GCCCCCCGGA CTTGCCTGCT CTGCGGCGAT 
ACGGCCGGCG CACGCACGCT CTGCCCCGGC TGCCGCGACA GCCTGCCTTG GCACCGCGCG
CCGCAATGCC CGCGCTGCGC GACGCCGACC CCCGGTGGCG CGGTATGCGG CGCCTGCCTC
AAGCATTCGC CGGCCTTCGA CCGCACCATC GCGGCGCTGG CTTACGCGTT TCCGCTCGAC
CGCATGATTC CGCGGCTCAA ATATCACGGC GCGCTCGCCG TGGCGCCGTT ACTCGGCGAA
TGCCTGACCG AGGCGTGCAG GACGCAGCCC CGCCCTGACC GCCTGCTCGC GATGCCCCTG
CACGCCGGGC GTATCCGCGA GCGCGGGTTC AACCACGCGA CCGAGATCGC GCGCGACGTG
GCGAAGCGCC TTCAGCTACC GCTCGACCGC GACAGTTGCC GGCGCATTCG CGACACCCCG
CCGCAGATGG GCCTGCGACA CGACGCGCGA CGCCGCAACC TGCGTGGCGC CTTCGCCTGC
TCGACGGATC TGGGCGGGAT GCACGTCGCC GTGATCGACG ACGTCATGAC GACGGGGACG
AGCCTGAACG AACTCGCCGC GACCTTGAAG CGGGCCGGCG CACGCGAGGT GAGCTGCTGG
GTCGCGGCAC GCACGCTTCC GTATCGCGGC TGA
 
Protein sequence
MNIRSFLDHL APRTCLLCGD TAGARTLCPG CRDSLPWHRA PQCPRCATPT PGGAVCGACL 
KHSPAFDRTI AALAYAFPLD RMIPRLKYHG ALAVAPLLGE CLTEACRTQP RPDRLLAMPL
HAGRIRERGF NHATEIARDV AKRLQLPLDR DSCRRIRDTP PQMGLRHDAR RRNLRGAFAC
STDLGGMHVA VIDDVMTTGT SLNELAATLK RAGAREVSCW VAARTLPYRG