Gene Tbd_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0311 
Symbol 
ID3672097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp334788 
End bp336254 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content67% 
IMG OID637708972 
Producthypothetical protein 
Protein accessionYP_314069 
Protein GI74316329 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.23799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG GAGACAGTAT CCGCCACGGC GCCAAATGGG TGTTCATCGG CAACACCGGC 
AGCCAGCTCA TCAATTTCGC GCTGGGTCTG GTCCTCGCGC GCCTGTTGAT GCCGGCCGAA
TTCGGCATGG TCGCGACGAT CCTGATTTTC ACCAGTCTTG CCGGCTTCGT CGCCGGCGGC
GGCATGGGAC AGGCGATCGT GCGCGCCAAG GACGCCGGCA AACGCGACTT CGACCTGCTC
TTCACGCTGC AGATGCTGAT CGGCCTTGTC ATCGTCGCGT TCTTTTTCGC GCTCGCGCCG
GCCTTCGGCC GTTGGTACGA CAACCCGCTC TACGCCGACC TGCTGCGCGT CGCGGCGCTC
TCCTTCCTGA TCCGTCCCTT CTTCAACGTG CCGAGCAATA TGCTGCACCG CGACATGCGC
TTCAAGGCGA AGACCGCGGT CCAGCTCAGC AACCTCGTCG TCTACAACGC GGTCGCGCTG
AGTCTGGCGT GGCTCGGCCA GGGCCCGTGG AGTCTGATCC TCGCCGGCCT CTTCAGCGCG
CTCGCCGGCG CGCTGCAATT CGCCTGGTAC GCACGCTGGC GGCCCGGCTG GTGCTTCGAT
TTCGCCCGCG CCGGCGAATT GATGCGATAT GGCCTGCTGG CGTCGAGCAA CAACGTCGTG
CACTACGTGC GCAGCCAGCT CCCCACCTTC ATTCTCTCGC GCAGCCTCGG GCCGGCCGGC
GTCGGCCTGT TCAACAAGGC CGAGAGCTTG GCGGCCCGGC CGCATGGGTT CATCACCGGT
TCGGTGTACG AAGTGCTGTT CCGTGCGCTC GCCAAGGAAC AGGACAACCT CGACCGCTCG
CGTTACCTGT TTTTCCGCAG CCTCACGCTC GTCGCCGTCT ACGCGTTGCC GTTCTATGTC
GGCTTCCTGT GGCTCGCCGA GCCGCTCGTC GTCACGCTCT TCGGCGAGCG CTGGCGCGAT
TCCGCCGCGC CCCTGATGAT CCTGAGCCTC GCGGCGCCGC TGATGATGAT CGAGAACCTG
TCGGGCGCCG TTCTCGCGGC GCGCAGCTGG CTCGACAAGG AACTCGTCGC GCAGACGATC
ATGGTCGCGG TCGCGGCAGT CGCCATCGTC GCCGGTCTGC CCTACGGCAT GAACGGCGTC
GCCGCCGGCC TCGCTCTCGC GCTGCTCTAT ATGAGCGTCC ACATGTTCTG GCTCGCCAAG
CGCGCGCTCG AGGCGCGCTG GGCCGACCTC GCGCGCGCCT TCATGCCGGC CGCGCTGCTC
AACGCGATCC TGCTCGGCGC GCTGTGGCTG GCCGAGCAAA CCATTCCGCC GGGCTTGAAG
ACGTCCGACC CGCTCTACGT GCTGGTCATG GCCGGCGTCG GCGGGTCGGT CTACGCGGTC
TCCTTCCTCT ACCTGCCGAT TCCGGCGCTC GCCACAGAGA CGAGCCGCTG GAAAAGCAAA
CTCAAACTGT GCCGCGCCGC CGCATGA
 
Protein sequence
MSLGDSIRHG AKWVFIGNTG SQLINFALGL VLARLLMPAE FGMVATILIF TSLAGFVAGG 
GMGQAIVRAK DAGKRDFDLL FTLQMLIGLV IVAFFFALAP AFGRWYDNPL YADLLRVAAL
SFLIRPFFNV PSNMLHRDMR FKAKTAVQLS NLVVYNAVAL SLAWLGQGPW SLILAGLFSA
LAGALQFAWY ARWRPGWCFD FARAGELMRY GLLASSNNVV HYVRSQLPTF ILSRSLGPAG
VGLFNKAESL AARPHGFITG SVYEVLFRAL AKEQDNLDRS RYLFFRSLTL VAVYALPFYV
GFLWLAEPLV VTLFGERWRD SAAPLMILSL AAPLMMIENL SGAVLAARSW LDKELVAQTI
MVAVAAVAIV AGLPYGMNGV AAGLALALLY MSVHMFWLAK RALEARWADL ARAFMPAALL
NAILLGALWL AEQTIPPGLK TSDPLYVLVM AGVGGSVYAV SFLYLPIPAL ATETSRWKSK
LKLCRAAA