Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0297 |
Symbol | |
ID | 3672083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 317764 |
End bp | 319050 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637708958 |
Product | hypothetical protein |
Protein accession | YP_314055 |
Protein GI | 74316315 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.515931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGATA TTTTCGTCGT AAGCGTCATT TTCGGGTTGC TGCCTTTCGT CCTCAGACGT CCCTGGCTCG GCATCCTGCT CTGGTCGTGG CTCGGCTACA TGAACCCGCA CCGGCTGGCC TGGGGCTTCG CCTACAACCT GCCGTTTTCG ATGATCGTCG GCCTCGTCAC GATCGCCGCC TTCATGGCGT CGAAGGAAAA GAAGGAGATG CCGTGGACGC GGGAGACGAT TTTTCTCCTG ATCTTCGTCG CCTGGATGCT CTTCACGACG CTCTTCGCGT TCTATCCCGA CGTCGCCTGG ATGCAGTGGG ACAAGGTGTG GAAGATCCAG CTCATGATCT TTCTCACCGC GCTCATCATC AACGATCGCG ACAAGCTGCA CTGGCTGCTC TGGGTGATCG TGCTGTCCTT CGGTTTCTAC GGGATCAAGG GCGGCATCTT CACGATCATC AACGGCGGAG CCTACCGCGT GCAGGGGCCG AGCGAGACCT TCATCACGGG CAACAACGAA CTCGCGCTGG CGCTCGTGAT GACCATCCCG TTGATCCGCT ACCTGCATCT GCAGGACACC CGCAAGTGGA TGAAGACCGG GCTCGCCGCC GCGATGGTCC TGACCGGCGT CGCGGCGATC GGCAGCCAGT CGCGTGGCGG ACTCGTGGCG ATGGTCGCGA TGGGTATCTT TCTCTGGCTC AAGAGCCGCA ACAAGATCGT GACCGGCCTC TACATGGCCG TCGCGGTCGG CATCATCGCG GCGGTCATGC CGCAGGAATG GTACGACCGC ATGAACACGA TCAACACCTA CCAGGACGAC CAGTCGGCGC AGGGTCGGAT CAACGCCTGG CACACCGCGT TCAACGTCGC CAAGGACCGC GTCACCGGCG GCGGCTTCGA GATGTGGCGG CCGCCCGTGT TCCGCCAGTA CGCGCCGGAT CCCTACAACG TGCGCGACGT GCACAGCATC TATTTCGAGA TCATGGGCGA GCAGGGGTTC ATCGGCTTCG CGCTGTTCAT GCTGCTCGGG CTCCTGGCCT GGCTGCGCGC GCAGCAGATC ATCAAGCGCT GCAAGAAAGA TCCGGACAAG AAATGGGCCG CCGATCTGGC CGCGATGATC CAGGTCAGCC TGATCGGCTA CGCGGCAGGC GGCGCCTTCC TCGGCATGGG CTATTTCGAC CTGCCCTACC ACCTGATGGT CATTCTGGTG CTGGTCGCCA AATTCTCCGG CGTGCTGCAG AAACAGCCGG TGCCCGTGGG GGGATTCGGC AAGCGGCGCG AGGCCGCGGC GGGGTAG
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Protein sequence | MRDIFVVSVI FGLLPFVLRR PWLGILLWSW LGYMNPHRLA WGFAYNLPFS MIVGLVTIAA FMASKEKKEM PWTRETIFLL IFVAWMLFTT LFAFYPDVAW MQWDKVWKIQ LMIFLTALII NDRDKLHWLL WVIVLSFGFY GIKGGIFTII NGGAYRVQGP SETFITGNNE LALALVMTIP LIRYLHLQDT RKWMKTGLAA AMVLTGVAAI GSQSRGGLVA MVAMGIFLWL KSRNKIVTGL YMAVAVGIIA AVMPQEWYDR MNTINTYQDD QSAQGRINAW HTAFNVAKDR VTGGGFEMWR PPVFRQYAPD PYNVRDVHSI YFEIMGEQGF IGFALFMLLG LLAWLRAQQI IKRCKKDPDK KWAADLAAMI QVSLIGYAAG GAFLGMGYFD LPYHLMVILV LVAKFSGVLQ KQPVPVGGFG KRREAAAG
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