| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0287 |
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| Symbol | |
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| ID | 3671429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 305088 |
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| End bp | 305921 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708948 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_314045 |
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| Protein GI | 74316305 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACG CCCTGTCGGT CGACGTCGAG GATTACTTTC AGGTATCGGC GTTCGCGCCG
CACATTCCGC GCGAGCAATG GAACACGCTG CCGTGCCGAG TCGAACGCAA CGTCGATCTG
ATCCTCGACC TCTTCGACGA GAGCCGGTCG AAGGCGACCT TCTTCACGCT CGGCTGGATC
GCAGAGCGTT ATCCGCAGGT GGTGCGCCGC ATCGTCGACA ACGGCCACGA ACTCGCGAGC
CATGGCTACG GACACGAGCG CGCGAGCGAC CTTACGCCGG CCGCGTTTCG CGAGGACATC
ACGCGCGCCA AGCGTATCCT CGAGGACCTC GGCGGGGTCG CCGTGCGCGG CTACCGCGCG
CCGAGTTTCT CGATCGACCA TCGCAACTGG TGGGCGGTCG CCGAACTCGA AGAGGCCGGT
TACGTCTACA GCTCGAGCAT CTATCCGGTG CGGCACGACC ATTACGGCAT GCCCGACGCG
CCGCGTTTCC CGCATCGCCC GAACGGCGAG CGCGGCATTC TCGAGGTCCC GCCGACGACG
CTGCCGCTCT TCGGCCGCAA CCTGCCTGCA GCCGGAGGGG GCTGGTTTCG CCTGCTGCCC
TACGAGATGT CGCGCTGGAT GCTCAAGCGC GTCAACGCCC GCGACGGCGC GCCGTGCATG
TTCTACTTCC ACCCCTGGGA AGTCGACCCC GAGCAGCCGC GCCCGTCCGG CGTGTCGATG
AAGGCGCGCT TCCGCCACTA CGTCAATCTA CAGCGCACCG CGGGCCGCCT GCGCCGCCTG
CTGAACGACT TCGAATGGGA CCGCGTTGAC CGCGTGTTCC TTGGCGAGCC GTGA
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| Protein sequence | MKNALSVDVE DYFQVSAFAP HIPREQWNTL PCRVERNVDL ILDLFDESRS KATFFTLGWI
AERYPQVVRR IVDNGHELAS HGYGHERASD LTPAAFREDI TRAKRILEDL GGVAVRGYRA
PSFSIDHRNW WAVAELEEAG YVYSSSIYPV RHDHYGMPDA PRFPHRPNGE RGILEVPPTT
LPLFGRNLPA AGGGWFRLLP YEMSRWMLKR VNARDGAPCM FYFHPWEVDP EQPRPSGVSM
KARFRHYVNL QRTAGRLRRL LNDFEWDRVD RVFLGEP
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