| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0282 |
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| Symbol | |
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| ID | 3671424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 298888 |
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| End bp | 300423 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637708943 |
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| Product | polysaccharide chain length determinant protein |
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| Protein accession | YP_314040 |
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| Protein GI | 74316300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAG TTTTGCAGCA AGTTCTCGGC TACGCCAAGG CGGCGTGGCA ACGCCGCTGG
TGGGGCATCG CGGTGGCCTG GCTCGTATGT ATCGTCGGCT GGACCTGGGT CATGATCATC
CCGGACCGCT ACCAGGCGTC GGCGCGCGTC TACGTCGACA CGCAAACCCT CCTCAAGCCG
CTGTTGTCGG GGCTTGCTGC CGAGCCCAAC GTCGAGCAGC AGATCAAGCT CATGACGCGC
CAGCTGGTCA GCCGGCCGAC GCTGGAGAAG GTCGCGCGGA TGACCGATCT CGACGTGAGA
GCCAACTCGC CCGAGCAGAC CGAGGCGATG CTCAACGGGC TCGCGAGCAA GATCTCGATC
GCCGACGCTG GGCGCGAGAA CCTCTACACG ATCAGCTACC AGGACGCGAA CGGCGAACTC
GCCAAGAAGG TCGTGCAGTC GCTGCTCACG ATCTTCGTCG AGTCGAGTCT CGGCAAGACG
CGGCAGGACA TTTCGAGCTC GCAGCGCTTC ATCGAGGAGC AACTGCAGCA ATATCAGCAG
AAGCTGACCG ACGCCGAGAA CGCGCTCAAG GAATTCAAGC AGAAGAACAT CGGCATGATG
CCGGGGCAGG GTGGTGACTA CTACGCCAAG CTCGCCGAGG CGAGCGCCCA GTTGCGCCAG
GCGCAACTCG ACCAGCAGGA GGCGGTCAAC CGCCGCAACC AGCTCAAGCG CCAGCTGGCC
GATGAGGAGC CCGAGCTGAC CGCGGCCGCC GCGGCCGTGG CGACCGACAG CGAAATCGAC
GGGCGGATCC AGGCCCTGCA GAAGCAGATG GACCAGTTGC GTCTGCAATA CACCGAGCTG
CATCCCGACA TCCAGGCGAC CAAGCGCCTG ATCGAAAAGC TCGAGGCGCA GAAGAAGGCC
GATCTCGCGC AGAAGAAGGC CGATCCGGCC GGTGCGCGTA TCCAGAACCC GGTTTATCAG
CAGCTCACGA TCGCGATCGC CGAAGCCGAC GCGACGGTGG CGTCGCTGAG CGCGCGCGTG
GCCGAGTACC AGCGGCGCTA CGGCGAATTG CGCAACGCCT CCAACATGAT TCCGCAGGTC
GAGCAGGAAT ACACCCAGCT GATGCGCGAC TATGACGTCT ATCGCCAGAA CTACGACGCG
CTGCTGAAGC GCCGCGAGTC GGTGACGATG TCGGGCGAAG TCGAGAGCAA GACCGATACC
GTCGATTTCC GGGTCATCGA TCCGCCCTTC GTGCCGAGCC AGCCGGCCTG GCCGAATCGC
CCGCTGCTGC TGTCGCTGGT CACGCTGGGC GGCCTCGGAG CGGGTATCGC GGTGTCCTTC
CTCTTGAGCC AGCTGCGGCG CACGGTCACC GACCGTCGCG TGCTGCGCGA GCTGACCGGC
CTGCCGCTGC TCGGCGCGGT CTCGCGCGTC GAGACCGAGC AGTCTCGGCG TCGCCGGCGC
AAGGGCCTGC TGACCTATCT GGCCGCGCTC GGTAGCCTGA TTGCGGCTTA CGGTGCGGTG
ATGGTCCTGC AGCTTGTCGT GACGCGCGCG GGTTAG
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| Protein sequence | MDQVLQQVLG YAKAAWQRRW WGIAVAWLVC IVGWTWVMII PDRYQASARV YVDTQTLLKP
LLSGLAAEPN VEQQIKLMTR QLVSRPTLEK VARMTDLDVR ANSPEQTEAM LNGLASKISI
ADAGRENLYT ISYQDANGEL AKKVVQSLLT IFVESSLGKT RQDISSSQRF IEEQLQQYQQ
KLTDAENALK EFKQKNIGMM PGQGGDYYAK LAEASAQLRQ AQLDQQEAVN RRNQLKRQLA
DEEPELTAAA AAVATDSEID GRIQALQKQM DQLRLQYTEL HPDIQATKRL IEKLEAQKKA
DLAQKKADPA GARIQNPVYQ QLTIAIAEAD ATVASLSARV AEYQRRYGEL RNASNMIPQV
EQEYTQLMRD YDVYRQNYDA LLKRRESVTM SGEVESKTDT VDFRVIDPPF VPSQPAWPNR
PLLLSLVTLG GLGAGIAVSF LLSQLRRTVT DRRVLRELTG LPLLGAVSRV ETEQSRRRRR
KGLLTYLAAL GSLIAAYGAV MVLQLVVTRA G
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