Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0281 |
Symbol | |
ID | 3671423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 298185 |
End bp | 298808 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637708942 |
Product | polysaccharide export outer membrane protein |
Protein accession | YP_314039 |
Protein GI | 74316299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.585377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.906054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGA TCAAAAAGCA CCTCTCGCGC GCGAGCCTGC TGCTCGCAGT GGTCGCCGTC GCGGGATGCT CGGGTACGCC GACATACCCG CCTGCGCCCG AGCGCACCGG GCAGTACGAC TGGAATTACC TGGTCGGCCC GGGCGATTCG GTCAACGTCT TCGTATGGCG CAACCCCGAA GTCTCGGGCA CCTTCCCGGT GCGTCCAGAC GGCAAAATGA CCATGAACCT CGTCGAGGAT CTGCAGGCGT CCGGCAAGAC GCCGACGCAG CTCGCGCGGG ACATCGAAAA GGCGCTCGGC AAGTACATCC AGGAACCGAT CGTCACTGTC ATCGTCGGCG GCGGCATCGG GCCGTTCGAC CAGCAGATCC GCGTGGTCGG CGAAGCCGCC AAGCCCCAGG CGCTCAATTA CCGCGAGAAG ATGAGCCTCG TCGACCTCAT GATCGCGGTC GGCGGACTCA CCGATTTCGC TGCCGGCAAC AAGGCCTACA TCCTCCGCAC CGTCGACGGC AAGCAGGAGC GCCTCGGCGT CCGTCTCGAA GATCTGCTGC GCGGCGGCGA CGTCTCCGCA AACGTCGACA TGCGCCCCGG CGATGTCCTC GTCGTGCCTG AAAGCCTGTT CTAA
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Protein sequence | MITIKKHLSR ASLLLAVVAV AGCSGTPTYP PAPERTGQYD WNYLVGPGDS VNVFVWRNPE VSGTFPVRPD GKMTMNLVED LQASGKTPTQ LARDIEKALG KYIQEPIVTV IVGGGIGPFD QQIRVVGEAA KPQALNYREK MSLVDLMIAV GGLTDFAAGN KAYILRTVDG KQERLGVRLE DLLRGGDVSA NVDMRPGDVL VVPESLF
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