| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0278 |
|---|
| Symbol | |
|---|
| ID | 3671420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 296675 |
|---|
| End bp | 297277 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637708939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314036 |
|---|
| Protein GI | 74316296 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.126418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCT ACAAGCTGCG TATTCCGGCG CCTGCGGGCA GGCTGGAAAC GGTCATCGAC
GACCCGGAAA ACAATCGCCA GGGGCTGCTG CTCGTCGCCC ACCCCCATCC GCTGCACGGC
GGCAGCCTCG ACAACAAGGT CGTGACGACG CTGGCCAAGG CGGCGAACGA GGCGGGATGG
GTCAGCGTGC GGCCGAACTT CCGTGGCGTC GGCATGAGCG ACGGCGCCTT CGACGCCGGG
ATGGGCGAAA CCGATGACCT GCTGGCCGTC GCCCGCTTCG TCGAAGCGAG CTACCCGGGC
CTGCCCTGGG CGCTCGCCGG TTTCTCCTTC GGCGCCTTCG TGCAGCATCG GCTGCGCCAG
GAATTGCCGG CGAAACGCCT GATTCTGGTC GCGCCGGCGG TGACGATGTA CGAGTTCGAC
GCGGTGCCGG CCGATACGGT CGTGATCTTC GGCGAGGCCG ACGAGCTGAT CCCGCCACCC
GCGATCCGCC TGTGGGCCGA GAAACAGCAG CTGACGACCA AGGCGATCCC CGACGCGGGG
CATTTCTTCC ACGGCAAGCT CAAGGAACTC AAACAGGCTT TTCTCGAGGC CTGCCCGTGC
TGA
|
|---|
| Protein sequence | MKRYKLRIPA PAGRLETVID DPENNRQGLL LVAHPHPLHG GSLDNKVVTT LAKAANEAGW
VSVRPNFRGV GMSDGAFDAG MGETDDLLAV ARFVEASYPG LPWALAGFSF GAFVQHRLRQ
ELPAKRLILV APAVTMYEFD AVPADTVVIF GEADELIPPP AIRLWAEKQQ LTTKAIPDAG
HFFHGKLKEL KQAFLEACPC
|
|---|
| |