| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0267 |
|---|
| Symbol | |
|---|
| ID | 3671409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 288750 |
|---|
| End bp | 289598 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637708928 |
|---|
| Product | D-alanine transminase |
|---|
| Protein accession | YP_314025 |
|---|
| Protein GI | 74316285 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.935444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCT ATCTAAACGG CCGCTTCCAG CCGCTGGCCG AGGCGACGAT CCCCGTGCTC
GACCGCGGCT TCGTTTTCGG CGACGGTGTC TACGAACTGG TGCCGGTGTA TTCGCGCAAG
CCCTTCCGGC TCGACGCGCA TCTGACGCGC CTGCAGCACA GCCTCGACGG CATCCGTCTG
AGCAACCCGC ACACCCCGAC GCAGTGGCGG GACCTGATCC AGCATCTGAT CGCCGAGCAG
GACTTCGACG ACCAATCGGT CTACATCCAG GTGACGCGGG GAACCGCGCC GCGCGACCAT
GCCTTCCCCG TGGGCGTGCC GCCGACCGTG TTCATGTTCG CGCAGGCCCT CGTCACCGCG
ACACCTGCGC AGAAGGCGGT GGGGGTCTGC GCGGTCAGCG CGGTCGACAA CCGCTGGCTG
CGCTGCGACA TCAAGGCGAT TTCGCTGTTG CCGAACATCC TTCTACGCCA GCAGGCGACC
GATGCCGGCT GCGCGGAAAC CGTGATGTTC CGCGACGGTT TTCTGACCGA GGGCGCGGCG
AGCAATATCT TCGTCGTGAA AGACGGCGTG CTGCTGACGC CGCCCTCGTC GAACCTGATG
CTCACCGGGG TGACCCACGA CGTCGTGCTC GAACTCGCCG CGACGCTCGG CGTGCCGGTC
GAGATTCGCG CGATCGCCGA AGCCGAGGTG CGCCGCGCCG ACGAGCTGTG GATGACATCG
TCGACCAAGG AAATCATGCC GATCGTGATG CTCGACGGCG CGCCGGTCGG CGGCGGGGCG
CCCGGGCCGC TGGCGCAGAA ATTCGACGCC GCCTACGCCG CGTTCAAACG CGAGGTCATG
CGCGCATGA
|
|---|
| Protein sequence | MSVYLNGRFQ PLAEATIPVL DRGFVFGDGV YELVPVYSRK PFRLDAHLTR LQHSLDGIRL
SNPHTPTQWR DLIQHLIAEQ DFDDQSVYIQ VTRGTAPRDH AFPVGVPPTV FMFAQALVTA
TPAQKAVGVC AVSAVDNRWL RCDIKAISLL PNILLRQQAT DAGCAETVMF RDGFLTEGAA
SNIFVVKDGV LLTPPSSNLM LTGVTHDVVL ELAATLGVPV EIRAIAEAEV RRADELWMTS
STKEIMPIVM LDGAPVGGGA PGPLAQKFDA AYAAFKREVM RA
|
|---|
| |