| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0258 |
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| Symbol | gatA |
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| ID | 3671400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 279369 |
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| End bp | 280826 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708919 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_314016 |
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| Protein GI | 74316276 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC CCTCCCTTTC CGCCCTCGCT GCACAACTCG CGGCGAAACA GGTGTCGAGC
CGCGAGCTCG CGCAGCAATA TCTCGACCGC ATCGCCGCGC TGAACCCGAC GATCAACGCC
TTCATTACGG TCGACCCGGA GAAGACGCTC GCCGAGGCGG CGGCTGCCGA CGCGCTGATC
GCCGGCGGCG CCGCCGGACC GCTGACTGGC GTGCCGATCG CGCACAAGGA CATCTTCTGC
ACCGACGGCT GGCTCACGAC CTGCGGCTCG AAAATGCTCG CGAACTTCGT CGCGCCCTAC
GACGCCCACG TCATCGAGCG CTGCAAGGCC GCCGGCATGC CGAGCCTCGG CAAGACCAAC
ATGGACGAGT TCGCCATGGG CTCGTCGAAC GAAACCTCGT TCTTCGGCGC GGTGAAGAAC
CCGTGGAACG CCGGCTACGT GCCCGGCGGC TCGTCGGGCG GCGCCGCGGC CTGCGTCGCT
GCACGGATGG CACCCGCCGC GACCGGCACC GACACCGGCG GCTCGATCCG CCAGCCGGCC
GCGCTGTGCG GCATCACCGG GCTCAAGCCG ACCTACGGCC TGGTCTCGCG CTACGGCATG
ATCGCCTTCG CCTCGAGTCT CGACCAGGCG GGCCCGATGG CGCCGTCGGC CGAAGACTGT
GCGCGGCTTT TGAACGTGAT AACGGGCTTC GATCCGAAGG ACTCGACCAG CCTCGAGCGC
GAAAAGGAAG ACTACACGCG CGACCTCGAT CTCCCGCTCA CGGGCCTACG CGTCGGCCTG
CCGTGCGAAT TTTTTGCCGA GGGTCTCAAC AACGAGGTCG CCGCTGCGGT CGACGCCGCG
GTCAATGAAC TGAAGAAGCT CGGCGCGACG ACGGTCGAGA TCTCGCTCGC CAACTCCCGG
CTCGCGATCC CCGTCTACTA CGTGCTCGCG CCCGCCGAGG CGTCGTCCAA CCTCTCGCGC
TTCGACGGCG TGCGCTACGG CTACCGCGCC CCCGAGTACG CGGACCTCAA CGACATGTAC
GCCAAGACCC GTGCGCAGGG TTTCGGCGCG GAGGTCAAGC GCCGCATCAT GATCGGCACC
TACGTGCTGA GCCACGGCTA CTACGACGCC TACTACCTGC AGGCGCAAAA AATTCGCCGC
CTGATCGCGC ACGACTTCGC CGAGGCATTC AAGACCTGCG ACGTCATCCT CGGCCCGACC
GCGCCGGGCA CGGCATTCAA GCTCGGCGAG AAATCCGACG ACCCGGTCGA GATGTACCTC
AACGACCTCT ACACGATTCC GGCCAACCTC GCGGGCCTGC CCGGCATGAG CCTGCCCTGC
GGCTTCGATT CGCAGGGCCT GCCCATCGGC CTGCAGCTCG TCGGCGATTA TTTTTCCGAA
GCGAAGATGC TGAACGTCGC CCATCAGTAC CAGCGCGTCA CCGACTGGCA CGCGCGCCAA
CCGGAGGCGC TCGCATGA
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| Protein sequence | MPAPSLSALA AQLAAKQVSS RELAQQYLDR IAALNPTINA FITVDPEKTL AEAAAADALI
AGGAAGPLTG VPIAHKDIFC TDGWLTTCGS KMLANFVAPY DAHVIERCKA AGMPSLGKTN
MDEFAMGSSN ETSFFGAVKN PWNAGYVPGG SSGGAAACVA ARMAPAATGT DTGGSIRQPA
ALCGITGLKP TYGLVSRYGM IAFASSLDQA GPMAPSAEDC ARLLNVITGF DPKDSTSLER
EKEDYTRDLD LPLTGLRVGL PCEFFAEGLN NEVAAAVDAA VNELKKLGAT TVEISLANSR
LAIPVYYVLA PAEASSNLSR FDGVRYGYRA PEYADLNDMY AKTRAQGFGA EVKRRIMIGT
YVLSHGYYDA YYLQAQKIRR LIAHDFAEAF KTCDVILGPT APGTAFKLGE KSDDPVEMYL
NDLYTIPANL AGLPGMSLPC GFDSQGLPIG LQLVGDYFSE AKMLNVAHQY QRVTDWHARQ
PEALA
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