Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0250 |
Symbol | |
ID | 3671392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 272687 |
End bp | 273364 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637708911 |
Product | putative lipoprotein |
Protein accession | YP_314008 |
Protein GI | 74316268 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.810132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TACTCGGCGT CACGGCGCTC GCGCTGGCGC TCACCGGTTG CATCAGTTTC GACGGCCGCG GTAGCGCGGC GCCGACGATC CACTACGTCC TCGACGATGT CGTGCCGGCG GACACGGCGG CACCGCCCGC GGGCAGGGCT GCCGACGCCG GCGTCACGCC ACGCACGCTT CTCGTGCTCG ACACGACGAG CAGCGGTTTC TATAACAACG ACCAGCTCGT CTTCAGCCGC ACGCCGGGCA CGCGCGGCTA CTACCAGTTC GCACGCTGGA CCGAGCGCCC GGGCAAGCGC TTCGCCGATC TCCTGCGCAG CAGACTCGAC CGGCTCGGAG GCTACCGCGT GGCGGCGGCG AGCGGGCAGG TCCGCGGCGA CCTCCTGCTC GATACCGAAT TGATCGAGTT CTATCACGAT GCGCGCAGCC AGCCGGGGGA GGTCCATCTG TTGCTGCGCG CGGACCTGCT CGACCTCAAG CGGCGCACGC TGCTCGACCG ACGCGTGTTC GAGCAGCGCG TTCCGGTCGC CACCTACGAT GCCGCGGGGG CCGCTGCGGC GTCGGGCGTC GCGGTCGGCC ACACGCTAGA CCAACTCGCC GCCTGGCTCG CGAGCTTCGG TCAAACTGCC TACAATCCAG AACGTAACGC CCCAACGATA AGAGGAGAGT CGCCATGA
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Protein sequence | MKKILGVTAL ALALTGCISF DGRGSAAPTI HYVLDDVVPA DTAAPPAGRA ADAGVTPRTL LVLDTTSSGF YNNDQLVFSR TPGTRGYYQF ARWTERPGKR FADLLRSRLD RLGGYRVAAA SGQVRGDLLL DTELIEFYHD ARSQPGEVHL LLRADLLDLK RRTLLDRRVF EQRVPVATYD AAGAAAASGV AVGHTLDQLA AWLASFGQTA YNPERNAPTI RGESP
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